Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 SMG1P5-202ENST00000529428 4219 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 SMG1P2-201ENST00000566127 4221 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 RNU6-28P-201ENST00000362378 107 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 SNORA51.1-201ENST00000363243 140 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 RNU5A-8P-201ENST00000364102 114 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 RNU6-95P-201ENST00000384697 107 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AC097374.1-203ENST00000400783 485 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AC016027.5-201ENST00000427227 210 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 RPSAP65-201ENST00000429660 595 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AL391987.1-201ENST00000441025 200 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 HMGN3P1-201ENST00000453847 193 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AC245028.2-201ENST00000458673 253 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 RNA5SP116-201ENST00000516132 98 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 SNORA25.14-201ENST00000516481 132 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AC120036.3-201ENST00000517826 292 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AC109329.1-201ENST00000518744 317 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AC022559.1-201ENST00000520905 205 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AC140063.1-201ENST00000541343 259 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 SARNP-203ENST00000552080 726 ntTSL 2 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AC011445.2-201ENST00000599274 173 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AP000843.1-201ENST00000624880 701 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AC021753.1-201ENST00000635724 168 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AC008669.1-201ENST00000565823 2178 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AC011460.1-201ENST00000636268 1834 ntBASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
SNIP1Q8TAD8 AC005839.1-201ENST00000624148 3213 ntBASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 PPIAP24-201ENST00000328558 471 ntBASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 SNORD62.1-201ENST00000362541 86 ntBASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 RNA5SP172-201ENST00000365061 118 ntBASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 Y_RNA.576-201ENST00000384781 102 ntBASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 RPL9P21-201ENST00000392269 505 ntBASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 AC016769.3-201ENST00000396562 315 ntBASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 AL157702.1-201ENST00000398764 426 ntBASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 GCNT1P4-201ENST00000404096 329 ntBASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 RN7SKP222-201ENST00000410651 315 ntBASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 RNU4-46P-201ENST00000410818 138 ntBASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 BX682237.1-201ENST00000415016 335 ntBASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC6.38□□□□□ -1.39
SNIP1Q8TAD8 GAPDHP33-201ENST00000443168 1013 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms