Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
RFX6Q8HWS3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.66□□□□□ -1.66
RFX6Q8HWS3 AC048346.1-201ENST00000510247 144 ntBASIC4.66□□□□□ -1.66
RFX6Q8HWS3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC4.66□□□□□ -1.66
RFX6Q8HWS3 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.66□□□□□ -1.66
RFX6Q8HWS3 AC090151.1-201ENST00000520784 730 ntBASIC4.66□□□□□ -1.66
RFX6Q8HWS3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.66□□□□□ -1.66
RFX6Q8HWS3 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.66□□□□□ -1.66
RFX6Q8HWS3 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.66□□□□□ -1.66
RFX6Q8HWS3 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.66□□□□□ -1.66
RFX6Q8HWS3 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.66□□□□□ -1.66
RFX6Q8HWS3 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.66□□□□□ -1.66
RFX6Q8HWS3 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.66□□□□□ -1.66
RFX6Q8HWS3 CLPTM1LP1-201ENST00000604519 484 ntBASIC4.66□□□□□ -1.66
RFX6Q8HWS3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.66□□□□□ -1.66
RFX6Q8HWS3 AC091953.3-201ENST00000623220 236 ntBASIC4.66□□□□□ -1.66
RFX6Q8HWS3 AF246928.1-201ENST00000623768 87 ntBASIC4.66□□□□□ -1.66
RFX6Q8HWS3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.66□□□□□ -1.66
RFX6Q8HWS3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.66□□□□□ -1.66
RFX6Q8HWS3 OR2L1P-202ENST00000641567 1023 ntBASIC4.66□□□□□ -1.66
RFX6Q8HWS3 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.66□□□□□ -1.66
RFX6Q8HWS3 AC087359.1-201ENST00000508335 1740 ntBASIC4.66□□□□□ -1.66
RFX6Q8HWS3 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFX6Q8HWS3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFX6Q8HWS3 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.65□□□□□ -1.66
RFX6Q8HWS3 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RFX6Q8HWS3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 RNU6-1200P-201ENST00000384162 107 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 MIR659-201ENST00000384963 97 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 RNU6-1300P-201ENST00000391046 108 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 BTF3L4P1-201ENST00000413813 468 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 AC019178.2-201ENST00000423595 505 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 MUPP-201ENST00000438111 566 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 AL645937.3-201ENST00000453647 936 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 DDX39BP2-208ENST00000453923 258 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 RPS27AP17-201ENST00000463344 455 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 RPL30P6-201ENST00000475925 342 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 RPS27P23-201ENST00000487608 251 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 AC113430.1-201ENST00000506872 718 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 RNA5SP135-201ENST00000517019 125 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 AC110743.1-201ENST00000584870 478 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 AC119751.7-201ENST00000600494 245 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 AL390816.3-201ENST00000604527 1066 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 AL160290.3-201ENST00000604869 165 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 AC010201.1-201ENST00000605051 540 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 HULC.1-201ENST00000612720 240 ntBASIC4.65□□□□□ -1.67
RFX6Q8HWS3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
RFX6Q8HWS3 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFX6Q8HWS3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFX6Q8HWS3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.64□□□□□ -1.67
RFX6Q8HWS3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
RFX6Q8HWS3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFX6Q8HWS3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
RFX6Q8HWS3 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFX6Q8HWS3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RFX6Q8HWS3 AL391994.1-201ENST00000254724 282 ntBASIC4.64□□□□□ -1.67
RFX6Q8HWS3 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
RFX6Q8HWS3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RFX6Q8HWS3 Y_RNA.311-201ENST00000365068 96 ntBASIC4.64□□□□□ -1.67
RFX6Q8HWS3 RNA5SP87-201ENST00000384155 118 ntBASIC4.64□□□□□ -1.67
RFX6Q8HWS3 MIR550A3-201ENST00000390735 95 ntBASIC4.64□□□□□ -1.67
RFX6Q8HWS3 SDHCP2-201ENST00000398565 501 ntBASIC4.64□□□□□ -1.67
RFX6Q8HWS3 RNU2-6P-201ENST00000411404 190 ntBASIC4.64□□□□□ -1.67
RFX6Q8HWS3 AL022400.1-201ENST00000423946 935 ntBASIC4.64□□□□□ -1.67
RFX6Q8HWS3 IPMKP1-201ENST00000425988 855 ntBASIC4.64□□□□□ -1.67
RFX6Q8HWS3 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.64□□□□□ -1.67
RFX6Q8HWS3 DYNLL1P7-201ENST00000429273 258 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms