Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ATP1B3P1-201ENST00000605365 821 ntBASIC2.22□□□□□ -2.05
CSMD3Q7Z407 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 AL513302.2-201ENST00000562313 1842 ntBASIC2.22□□□□□ -2.05
CSMD3Q7Z407 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 TRGV5P-201ENST00000419915 354 ntBASIC2.22□□□□□ -2.05
CSMD3Q7Z407 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 RNU1-143P-201ENST00000516296 146 ntBASIC2.22□□□□□ -2.05
CSMD3Q7Z407 RAD21-204ENST00000518055 896 ntTSL 2 BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 AC018552.3-201ENST00000567416 561 ntBASIC2.22□□□□□ -2.05
CSMD3Q7Z407 U1.23-201ENST00000610293 146 ntBASIC2.22□□□□□ -2.05
CSMD3Q7Z407 RNU1-68P-201ENST00000615382 146 ntBASIC2.22□□□□□ -2.05
CSMD3Q7Z407 U1.39-201ENST00000621562 146 ntBASIC2.22□□□□□ -2.05
CSMD3Q7Z407 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 MRPL50P2-201ENST00000416821 482 ntBASIC2.22□□□□□ -2.05
CSMD3Q7Z407 ETF1P3-201ENST00000430422 1160 ntBASIC2.22□□□□□ -2.05
CSMD3Q7Z407 IFNA11P-201ENST00000446352 526 ntBASIC2.22□□□□□ -2.05
CSMD3Q7Z407 SEPT14P1-201ENST00000458703 648 ntBASIC2.22□□□□□ -2.05
CSMD3Q7Z407 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 RIOK3P1-201ENST00000418778 1528 ntBASIC2.22□□□□□ -2.05
CSMD3Q7Z407 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 AC020633.1-201ENST00000468439 2247 ntBASIC2.22□□□□□ -2.05
CSMD3Q7Z407 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
CSMD3Q7Z407 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.05
CSMD3Q7Z407 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.05
CSMD3Q7Z407 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC2.21□□□□□ -2.05
CSMD3Q7Z407 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.21□□□□□ -2.05
CSMD3Q7Z407 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.21□□□□□ -2.05
CSMD3Q7Z407 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.21□□□□□ -2.05
CSMD3Q7Z407 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.05
CSMD3Q7Z407 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.21□□□□□ -2.05
CSMD3Q7Z407 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.21□□□□□ -2.05
CSMD3Q7Z407 AC022149.2-201ENST00000621061 203 ntBASIC2.21□□□□□ -2.05
CSMD3Q7Z407 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.05
CSMD3Q7Z407 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
CSMD3Q7Z407 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
CSMD3Q7Z407 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC2.21□□□□□ -2.06
CSMD3Q7Z407 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
CSMD3Q7Z407 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.21□□□□□ -2.06
CSMD3Q7Z407 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CSMD3Q7Z407 MIR22-201ENST00000362190 85 ntBASIC2.21□□□□□ -2.06
CSMD3Q7Z407 MIR512-1-201ENST00000384913 84 ntBASIC2.21□□□□□ -2.06
CSMD3Q7Z407 HSPE1P16-201ENST00000426640 348 ntBASIC2.21□□□□□ -2.06
CSMD3Q7Z407 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC2.21□□□□□ -2.06
CSMD3Q7Z407 AC010469.1-201ENST00000463864 576 ntBASIC2.21□□□□□ -2.06
CSMD3Q7Z407 RPL31P50-201ENST00000471002 296 ntBASIC2.21□□□□□ -2.06
CSMD3Q7Z407 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
CSMD3Q7Z407 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC2.21□□□□□ -2.06
CSMD3Q7Z407 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CSMD3Q7Z407 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC2.21□□□□□ -2.06
CSMD3Q7Z407 AC007899.1-201ENST00000412776 775 ntBASIC2.21□□□□□ -2.06
CSMD3Q7Z407 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.21□□□□□ -2.06
CSMD3Q7Z407 AC092809.1-201ENST00000441469 474 ntBASIC2.21□□□□□ -2.06
CSMD3Q7Z407 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.21□□□□□ -2.06
CSMD3Q7Z407 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC2.21□□□□□ -2.06
CSMD3Q7Z407 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.21□□□□□ -2.06
CSMD3Q7Z407 KCTD9P6-201ENST00000522306 950 ntBASIC2.21□□□□□ -2.06
CSMD3Q7Z407 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.21□□□□□ -2.06
CSMD3Q7Z407 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CSMD3Q7Z407 AC139713.2-215ENST00000641428 5037 ntBASIC2.21□□□□□ -2.06
CSMD3Q7Z407 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CSMD3Q7Z407 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 FTLP19-201ENST00000433300 394 ntBASIC2.2□□□□□ -2.06
CSMD3Q7Z407 HLA-N-201ENST00000437516 135 ntBASIC2.2□□□□□ -2.06
CSMD3Q7Z407 RPS12P18-201ENST00000442381 270 ntBASIC2.2□□□□□ -2.06
CSMD3Q7Z407 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 AP002812.4-201ENST00000532139 286 ntBASIC2.2□□□□□ -2.06
CSMD3Q7Z407 AC103968.1-201ENST00000557841 573 ntBASIC2.2□□□□□ -2.06
CSMD3Q7Z407 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 AL732372.2-225ENST00000642124 456 ntBASIC2.2□□□□□ -2.06
CSMD3Q7Z407 MTCO1P9-201ENST00000505577 1534 ntBASIC2.2□□□□□ -2.06
CSMD3Q7Z407 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 AL356057.1-202ENST00000402263 756 ntBASIC2.2□□□□□ -2.06
CSMD3Q7Z407 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.2□□□□□ -2.06
CSMD3Q7Z407 snoU13.15-201ENST00000459407 104 ntBASIC2.2□□□□□ -2.06
CSMD3Q7Z407 AC110794.1-201ENST00000505816 425 ntBASIC2.2□□□□□ -2.06
CSMD3Q7Z407 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms