Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 Y_RNA.400-201ENST00000383963 111 ntBASIC7.28□□□□□ -1.24
VARS2Q5ST30 Y_RNA.581-201ENST00000391017 97 ntBASIC7.28□□□□□ -1.24
VARS2Q5ST30 AL590635.1-201ENST00000406314 586 ntBASIC7.28□□□□□ -1.24
VARS2Q5ST30 AL359382.1-201ENST00000417838 426 ntTSL 5 BASIC7.28□□□□□ -1.24
VARS2Q5ST30 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC7.28□□□□□ -1.24
VARS2Q5ST30 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.28□□□□□ -1.24
VARS2Q5ST30 GAPDHP20-201ENST00000444107 1007 ntBASIC7.28□□□□□ -1.24
VARS2Q5ST30 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.28□□□□□ -1.24
VARS2Q5ST30 AC239809.1-201ENST00000450470 217 ntBASIC7.28□□□□□ -1.24
VARS2Q5ST30 RNU7-167P-201ENST00000459160 62 ntBASIC7.28□□□□□ -1.24
VARS2Q5ST30 IGHVII-53-1-201ENST00000519538 255 ntBASIC7.28□□□□□ -1.24
VARS2Q5ST30 AF279873.1-201ENST00000523393 313 ntBASIC7.28□□□□□ -1.24
VARS2Q5ST30 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
VARS2Q5ST30 TOMM20P1-201ENST00000534518 427 ntBASIC7.28□□□□□ -1.24
VARS2Q5ST30 AC007068.2-201ENST00000543168 395 ntBASIC7.28□□□□□ -1.24
VARS2Q5ST30 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC7.28□□□□□ -1.24
VARS2Q5ST30 ULK4P1-202ENST00000565174 503 ntBASIC7.28□□□□□ -1.24
VARS2Q5ST30 AC090525.3-201ENST00000605601 189 ntBASIC7.28□□□□□ -1.24
VARS2Q5ST30 MIR6862-1-201ENST00000613016 70 ntBASIC7.28□□□□□ -1.24
VARS2Q5ST30 MIR6862-2-201ENST00000614755 70 ntBASIC7.28□□□□□ -1.24
VARS2Q5ST30 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.28□□□□□ -1.24
VARS2Q5ST30 AC061999.1-201ENST00000624454 177 ntBASIC7.28□□□□□ -1.24
VARS2Q5ST30 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC7.28□□□□□ -1.24
VARS2Q5ST30 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.28□□□□□ -1.24
VARS2Q5ST30 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VARS2Q5ST30 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VARS2Q5ST30 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.28□□□□□ -1.24
VARS2Q5ST30 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
VARS2Q5ST30 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VARS2Q5ST30 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
VARS2Q5ST30 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
VARS2Q5ST30 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.28□□□□□ -1.24
VARS2Q5ST30 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
VARS2Q5ST30 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
VARS2Q5ST30 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.28□□□□□ -1.24
VARS2Q5ST30 BDP1P-201ENST00000582658 1990 ntBASIC7.28□□□□□ -1.24
VARS2Q5ST30 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.28□□□□□ -1.24
VARS2Q5ST30 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
VARS2Q5ST30 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.27□□□□□ -1.24
VARS2Q5ST30 ST7-206ENST00000393447 2182 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
VARS2Q5ST30 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.24
VARS2Q5ST30 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
VARS2Q5ST30 TCP11X2-202ENST00000453326 1747 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
VARS2Q5ST30 TCP11X1-201ENST00000597070 1747 ntTSL 2 BASIC7.27□□□□□ -1.25
VARS2Q5ST30 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.25
VARS2Q5ST30 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
VARS2Q5ST30 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VARS2Q5ST30 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.27□□□□□ -1.25
VARS2Q5ST30 AL034417.4-202ENST00000642135 2236 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 AP003119.3-201ENST00000566747 4192 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VARS2Q5ST30 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC7.27□□□□□ -1.25
VARS2Q5ST30 RNA5SP435-201ENST00000364044 108 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VARS2Q5ST30 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
VARS2Q5ST30 UBBP1-201ENST00000392399 473 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 RNU6-257P-201ENST00000410238 98 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 RNU6-174P-201ENST00000410406 106 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 AC244452.1-201ENST00000413798 141 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 GAPDHP57-201ENST00000424400 585 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 FAR2P4-202ENST00000425399 584 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC7.27□□□□□ -1.25
VARS2Q5ST30 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC7.27□□□□□ -1.25
VARS2Q5ST30 AC245291.3-201ENST00000443400 292 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 AKR1D1P1-201ENST00000457236 936 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 AC099340.1-201ENST00000475247 599 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 RPS4XP23-201ENST00000487801 237 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 RNU5F-8P-201ENST00000515941 111 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 SNORD116-28-201ENST00000516123 91 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 RNU6-1333P-201ENST00000516162 93 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 AC109479.2-201ENST00000517842 174 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC7.27□□□□□ -1.25
VARS2Q5ST30 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC7.27□□□□□ -1.25
VARS2Q5ST30 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC7.27□□□□□ -1.25
VARS2Q5ST30 FLVCR2-204ENST00000553587 584 ntTSL 2 BASIC7.27□□□□□ -1.25
VARS2Q5ST30 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.27□□□□□ -1.25
VARS2Q5ST30 MIR3154-201ENST00000577829 84 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 MIR4732-201ENST00000581873 76 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 AC060771.1-201ENST00000582031 164 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC7.27□□□□□ -1.25
VARS2Q5ST30 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.27□□□□□ -1.25
VARS2Q5ST30 AC111186.1-201ENST00000604684 130 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 MIR6071-201ENST00000616741 78 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VARS2Q5ST30 AL596275.2-204ENST00000641628 552 ntBASIC7.27□□□□□ -1.25
VARS2Q5ST30 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC7.27□□□□□ -1.25
VARS2Q5ST30 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC7.27□□□□□ -1.25
VARS2Q5ST30 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
VARS2Q5ST30 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VARS2Q5ST30 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VARS2Q5ST30 GUSBP1-205ENST00000607545 4157 ntTSL 2 BASIC7.27□□□□□ -1.25
VARS2Q5ST30 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VARS2Q5ST30 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VARS2Q5ST30 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
VARS2Q5ST30 FCF1-201ENST00000341162 4341 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VARS2Q5ST30 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VARS2Q5ST30 AP000688.2-201ENST00000422473 2336 ntTSL 2 BASIC7.27□□□□□ -1.25
VARS2Q5ST30 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
VARS2Q5ST30 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
VARS2Q5ST30 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms