Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AL031679.1-201ENST00000400616 525 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 RAP1BP3-201ENST00000407180 549 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 U3.32-201ENST00000408116 212 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 RNA5SP487-201ENST00000410186 122 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 RNU6-603P-201ENST00000411403 107 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 MTCO1P17-201ENST00000411522 491 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
IRF9Q00978 DPPA2P1-201ENST00000428060 556 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 AC000111.3-201ENST00000433478 193 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC5.17□□□□□ -1.58
IRF9Q00978 AC009961.2-201ENST00000435771 251 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 GAPDHP58-201ENST00000438477 1006 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 RPL7AP61-201ENST00000443410 636 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 OR7E125P-201ENST00000443450 846 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 AP000281.1-201ENST00000444036 316 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 HMGN1P36-201ENST00000446623 298 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.17□□□□□ -1.58
IRF9Q00978 AC002381.1-201ENST00000447049 280 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 AP000542.1-201ENST00000448473 371 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 BX842559.2-201ENST00000451418 605 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.17□□□□□ -1.58
IRF9Q00978 AC099563.1-201ENST00000456086 418 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 RN7SL174P-201ENST00000475578 289 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.17□□□□□ -1.58
IRF9Q00978 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
IRF9Q00978 AC012123.2-201ENST00000485809 248 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.17□□□□□ -1.58
IRF9Q00978 AC006427.1-201ENST00000514359 712 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.17□□□□□ -1.58
IRF9Q00978 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.17□□□□□ -1.58
IRF9Q00978 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
IRF9Q00978 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.17□□□□□ -1.58
IRF9Q00978 AP005205.1-201ENST00000563503 508 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 RPL10P14-201ENST00000565265 298 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 AL391840.1-201ENST00000571144 367 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 MIR3682-201ENST00000581338 84 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.17□□□□□ -1.58
IRF9Q00978 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.17□□□□□ -1.58
IRF9Q00978 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.17□□□□□ -1.58
IRF9Q00978 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.17□□□□□ -1.58
IRF9Q00978 BNIP3P30-201ENST00000601184 574 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 COX6CP4-201ENST00000605798 228 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 AC009237.17-201ENST00000618111 748 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 AL445264.1-201ENST00000621719 171 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5.17□□□□□ -1.58
IRF9Q00978 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.17□□□□□ -1.58
IRF9Q00978 MIR4302-201ENST00000638058 60 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
IRF9Q00978 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
IRF9Q00978 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
IRF9Q00978 THAP12P5-201ENST00000405864 2275 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.17□□□□□ -1.58
IRF9Q00978 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
IRF9Q00978 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
IRF9Q00978 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
IRF9Q00978 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.17□□□□□ -1.58
IRF9Q00978 AC009229.4-201ENST00000623854 1947 ntBASIC5.17□□□□□ -1.58
IRF9Q00978 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
IRF9Q00978 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
IRF9Q00978 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 AC095050.2-201ENST00000510748 1458 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.16□□□□□ -1.58
IRF9Q00978 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
IRF9Q00978 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
IRF9Q00978 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
IRF9Q00978 RNY4P34-201ENST00000364779 95 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC5.16□□□□□ -1.58
IRF9Q00978 RNU1-77P-201ENST00000390868 162 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 PEX12P1-201ENST00000400284 1048 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 AL024474.1-201ENST00000404655 591 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 GSTA9P-201ENST00000406231 611 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 AC245052.5-201ENST00000416320 649 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC5.16□□□□□ -1.58
IRF9Q00978 MTND4LP10-201ENST00000435146 291 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 AL161636.2-201ENST00000445179 927 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.16□□□□□ -1.58
IRF9Q00978 AC004980.3-201ENST00000447046 365 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 AC239809.1-201ENST00000450470 217 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 USP9YP34-201ENST00000453983 808 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
IRF9Q00978 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
IRF9Q00978 HMGB1P36-201ENST00000487709 576 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 COX6B1P2-201ENST00000489624 230 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 AC012170.1-201ENST00000495139 359 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.16□□□□□ -1.58
IRF9Q00978 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.16□□□□□ -1.58
IRF9Q00978 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.16□□□□□ -1.58
IRF9Q00978 RNU6-1003P-201ENST00000517099 105 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.16□□□□□ -1.58
IRF9Q00978 AC022861.1-201ENST00000522981 663 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 HMGB1P40-201ENST00000525121 540 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.16□□□□□ -1.58
IRF9Q00978 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC5.16□□□□□ -1.58
IRF9Q00978 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC5.16□□□□□ -1.58
IRF9Q00978 LSM3P2-201ENST00000551246 273 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 AC006349.1-201ENST00000555526 235 ntBASIC5.16□□□□□ -1.58
IRF9Q00978 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.16□□□□□ -1.58
IRF9Q00978 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.16□□□□□ -1.58
IRF9Q00978 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.16□□□□□ -1.58
IRF9Q00978 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms