Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.71□□□□□ -1.82
RPS4XP62701 AC099522.1-202ENST00000514718 367 ntBASIC3.71□□□□□ -1.82
RPS4XP62701 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RPS4XP62701 RNU7-143P-201ENST00000516781 65 ntBASIC3.71□□□□□ -1.82
RPS4XP62701 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.71□□□□□ -1.82
RPS4XP62701 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.71□□□□□ -1.82
RPS4XP62701 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.71□□□□□ -1.82
RPS4XP62701 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.71□□□□□ -1.82
RPS4XP62701 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.71□□□□□ -1.82
RPS4XP62701 DEFB109D-201ENST00000529497 240 ntBASIC3.71□□□□□ -1.82
RPS4XP62701 PTP4A1P6-201ENST00000531034 478 ntBASIC3.71□□□□□ -1.82
RPS4XP62701 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.71□□□□□ -1.82
RPS4XP62701 AL020997.3-201ENST00000602843 359 ntBASIC3.71□□□□□ -1.82
RPS4XP62701 AC018754.1-201ENST00000607486 925 ntBASIC3.71□□□□□ -1.82
RPS4XP62701 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.71□□□□□ -1.82
RPS4XP62701 AF129408.1-201ENST00000608767 431 ntBASIC3.71□□□□□ -1.82
RPS4XP62701 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.71□□□□□ -1.82
RPS4XP62701 VN1R7P-201ENST00000619242 903 ntBASIC3.71□□□□□ -1.82
RPS4XP62701 MIR4727-201ENST00000622232 55 ntBASIC3.71□□□□□ -1.82
RPS4XP62701 AL773545.4-201ENST00000637262 310 ntBASIC3.71□□□□□ -1.82
RPS4XP62701 FAM157B-203ENST00000639350 358 ntBASIC3.71□□□□□ -1.82
RPS4XP62701 AL513478.4-201ENST00000641636 310 ntBASIC3.71□□□□□ -1.82
RPS4XP62701 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.71□□□□□ -1.82
RPS4XP62701 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
RPS4XP62701 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
RPS4XP62701 ZNF33CP-201ENST00000432492 2030 ntBASIC3.71□□□□□ -1.82
RPS4XP62701 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RPS4XP62701 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
RPS4XP62701 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RPS4XP62701 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.71□□□□□ -1.82
RPS4XP62701 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
RPS4XP62701 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
RPS4XP62701 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
RPS4XP62701 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
RPS4XP62701 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.7□□□□□ -1.82
RPS4XP62701 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RPS4XP62701 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.7□□□□□ -1.82
RPS4XP62701 CASC19-261ENST00000641853 1638 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 AC025125.1-201ENST00000624743 1922 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 SAGE4P-201ENST00000442271 3381 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.7□□□□□ -1.82
RPS4XP62701 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
RPS4XP62701 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.7□□□□□ -1.82
RPS4XP62701 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPS4XP62701 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPS4XP62701 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
RPS4XP62701 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RPS4XP62701 OR1L1-202ENST00000373686 1083 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPS4XP62701 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RPS4XP62701 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.7□□□□□ -1.82
RPS4XP62701 AL161909.1-201ENST00000397390 712 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 DSTNP4-201ENST00000399472 474 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.7□□□□□ -1.82
RPS4XP62701 AC108032.1-201ENST00000416706 207 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 AC004552.1-201ENST00000419089 348 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 AC027644.1-201ENST00000419595 298 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC3.7□□□□□ -1.82
RPS4XP62701 SFR1P2-201ENST00000421841 730 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 UBE2V1P1-201ENST00000430836 445 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.7□□□□□ -1.82
RPS4XP62701 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.7□□□□□ -1.82
RPS4XP62701 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.7□□□□□ -1.82
RPS4XP62701 AC006011.1-201ENST00000442758 349 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.7□□□□□ -1.82
RPS4XP62701 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 AL451050.1-201ENST00000450126 415 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.7□□□□□ -1.82
RPS4XP62701 RPL37P6-202ENST00000464216 403 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 RPS26P3-201ENST00000470205 348 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 AC090543.2-201ENST00000483963 348 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 AC004057.1-201ENST00000485827 348 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.7□□□□□ -1.82
RPS4XP62701 RPS27AP13-201ENST00000498403 237 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 HMGB3P13-201ENST00000511263 607 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 OR8I1P-201ENST00000529291 931 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.7□□□□□ -1.82
RPS4XP62701 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.7□□□□□ -1.82
RPS4XP62701 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.7□□□□□ -1.82
RPS4XP62701 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.7□□□□□ -1.82
RPS4XP62701 ZNF971P-201ENST00000562068 1249 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.7□□□□□ -1.82
RPS4XP62701 EIF5A2P1-201ENST00000564027 460 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 AP001180.3-201ENST00000582221 145 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 AC105429.2-201ENST00000610567 517 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 AC105227.2-201ENST00000615075 605 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPS4XP62701 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPS4XP62701 MTND4P26-201ENST00000415971 1359 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RPS4XP62701 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPS4XP62701 AC138393.1-206ENST00000540997 1886 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 AC116667.1-201ENST00000604855 2072 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPS4XP62701 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPS4XP62701 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
RPS4XP62701 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.7□□□□□ -1.82
RPS4XP62701 MTND4P9-201ENST00000507819 1346 ntBASIC3.7□□□□□ -1.82
RPS4XP62701 DCAF13P3-201ENST00000561147 1334 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms