Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CXCL12P48061 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.51□□□□□ -1.85
CXCL12P48061 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.51□□□□□ -1.85
CXCL12P48061 AC025946.2-201ENST00000603398 234 ntBASIC3.51□□□□□ -1.85
CXCL12P48061 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.51□□□□□ -1.85
CXCL12P48061 AL354976.1-201ENST00000613843 387 ntBASIC3.51□□□□□ -1.85
CXCL12P48061 AC006386.2-201ENST00000624491 75 ntBASIC3.51□□□□□ -1.85
CXCL12P48061 AC012005.1-201ENST00000624575 75 ntBASIC3.51□□□□□ -1.85
CXCL12P48061 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
CXCL12P48061 AL645937.1-201ENST00000641739 1652 ntBASIC3.51□□□□□ -1.85
CXCL12P48061 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.51□□□□□ -1.85
CXCL12P48061 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.51□□□□□ -1.85
CXCL12P48061 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CXCL12P48061 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
CXCL12P48061 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
CXCL12P48061 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CXCL12P48061 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
CXCL12P48061 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CXCL12P48061 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.5□□□□□ -1.85
CXCL12P48061 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CXCL12P48061 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CXCL12P48061 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CXCL12P48061 RNU4-7P-201ENST00000364758 141 ntBASIC3.5□□□□□ -1.85
CXCL12P48061 MT-TP-201ENST00000387461 68 ntBASIC3.5□□□□□ -1.85
CXCL12P48061 RAC1P3-201ENST00000416129 580 ntBASIC3.5□□□□□ -1.85
CXCL12P48061 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.5□□□□□ -1.85
CXCL12P48061 EIF4EP1-201ENST00000422311 642 ntBASIC3.5□□□□□ -1.85
CXCL12P48061 AL356806.1-201ENST00000422524 916 ntBASIC3.5□□□□□ -1.85
CXCL12P48061 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC3.5□□□□□ -1.85
CXCL12P48061 BX119904.1-201ENST00000432026 348 ntBASIC3.5□□□□□ -1.85
CXCL12P48061 AC093716.1-201ENST00000435923 377 ntBASIC3.5□□□□□ -1.85
CXCL12P48061 TPTE2P3-201ENST00000441562 1189 ntBASIC3.5□□□□□ -1.85
CXCL12P48061 FTH1P25-201ENST00000447665 469 ntBASIC3.5□□□□□ -1.85
CXCL12P48061 EIF2S2P4-201ENST00000461070 984 ntBASIC3.5□□□□□ -1.85
CXCL12P48061 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.5□□□□□ -1.85
CXCL12P48061 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.5□□□□□ -1.85
CXCL12P48061 MIR4276-201ENST00000584832 70 ntBASIC3.5□□□□□ -1.85
CXCL12P48061 CKS1BP3-201ENST00000600888 237 ntBASIC3.5□□□□□ -1.85
CXCL12P48061 AC090953.1-201ENST00000604305 1092 ntBASIC3.5□□□□□ -1.85
CXCL12P48061 AC015802.5-201ENST00000607478 399 ntBASIC3.5□□□□□ -1.85
CXCL12P48061 AC019131.2-201ENST00000609071 870 ntBASIC3.5□□□□□ -1.85
CXCL12P48061 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC3.5□□□□□ -1.85
CXCL12P48061 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.5□□□□□ -1.85
CXCL12P48061 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.5□□□□□ -1.85
CXCL12P48061 SAGE2P-201ENST00000420011 2126 ntBASIC3.5□□□□□ -1.85
CXCL12P48061 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CXCL12P48061 HSPA8P19-201ENST00000505359 1517 ntBASIC3.49□□□□□ -1.85
CXCL12P48061 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CXCL12P48061 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CXCL12P48061 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CXCL12P48061 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CXCL12P48061 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CXCL12P48061 MIR448-201ENST00000362131 111 ntBASIC3.49□□□□□ -1.85
CXCL12P48061 RNU1-108P-201ENST00000362556 161 ntBASIC3.49□□□□□ -1.85
CXCL12P48061 MIR7-1-201ENST00000384871 110 ntBASIC3.49□□□□□ -1.85
CXCL12P48061 SNORD65-201ENST00000391079 73 ntBASIC3.49□□□□□ -1.85
CXCL12P48061 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CXCL12P48061 AL136131.1-201ENST00000406079 803 ntBASIC3.49□□□□□ -1.85
CXCL12P48061 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.49□□□□□ -1.85
CXCL12P48061 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.49□□□□□ -1.85
CXCL12P48061 SDCBPP2-201ENST00000424643 885 ntBASIC3.49□□□□□ -1.85
CXCL12P48061 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.49□□□□□ -1.85
CXCL12P48061 AC011742.1-201ENST00000431448 434 ntBASIC3.49□□□□□ -1.85
CXCL12P48061 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.49□□□□□ -1.85
CXCL12P48061 AP000936.3-201ENST00000438127 255 ntBASIC3.49□□□□□ -1.85
CXCL12P48061 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.49□□□□□ -1.85
CXCL12P48061 RPS3AP43-201ENST00000479743 781 ntBASIC3.49□□□□□ -1.85
CXCL12P48061 AC011825.1-201ENST00000484967 388 ntBASIC3.49□□□□□ -1.85
CXCL12P48061 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.49□□□□□ -1.85
CXCL12P48061 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC3.49□□□□□ -1.85
CXCL12P48061 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.49□□□□□ -1.85
CXCL12P48061 RNA5SP341-201ENST00000516261 117 ntBASIC3.49□□□□□ -1.85
CXCL12P48061 SNORA48.9-201ENST00000516419 162 ntBASIC3.49□□□□□ -1.85
CXCL12P48061 RNU6-579P-201ENST00000516879 102 ntBASIC3.49□□□□□ -1.85
CXCL12P48061 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.49□□□□□ -1.85
CXCL12P48061 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC3.49□□□□□ -1.85
CXCL12P48061 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.49□□□□□ -1.85
CXCL12P48061 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.49□□□□□ -1.85
CXCL12P48061 BMS1P7-201ENST00000602440 1052 ntBASIC3.49□□□□□ -1.85
CXCL12P48061 AC006557.5-201ENST00000603126 811 ntBASIC3.49□□□□□ -1.85
CXCL12P48061 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.49□□□□□ -1.85
CXCL12P48061 AC073111.2-201ENST00000605657 1075 ntBASIC3.49□□□□□ -1.85
CXCL12P48061 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.49□□□□□ -1.85
CXCL12P48061 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.49□□□□□ -1.85
CXCL12P48061 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
CXCL12P48061 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CXCL12P48061 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
CXCL12P48061 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CXCL12P48061 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CXCL12P48061 ZNF807-201ENST00000328088 1707 ntBASIC3.48□□□□□ -1.85
CXCL12P48061 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
CXCL12P48061 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CXCL12P48061 RN7SKP44-201ENST00000363602 316 ntBASIC3.48□□□□□ -1.85
CXCL12P48061 RN7SKP53-201ENST00000411337 315 ntBASIC3.48□□□□□ -1.85
CXCL12P48061 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.48□□□□□ -1.85
CXCL12P48061 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.48□□□□□ -1.85
CXCL12P48061 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.48□□□□□ -1.85
CXCL12P48061 RPL23AP4-201ENST00000427757 463 ntBASIC3.48□□□□□ -1.85
CXCL12P48061 NDUFB1P1-201ENST00000435191 180 ntBASIC3.48□□□□□ -1.85
CXCL12P48061 ARL5AP3-201ENST00000439327 386 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms