Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
KRT9P35527 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
KRT9P35527 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.7□□□□□ -1.66
KRT9P35527 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
KRT9P35527 AC012618.3-205ENST00000637896 1496 ntBASIC4.69□□□□□ -1.66
KRT9P35527 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRT9P35527 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRT9P35527 OR56B2P-202ENST00000641377 2453 ntBASIC4.69□□□□□ -1.66
KRT9P35527 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRT9P35527 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRT9P35527 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.69□□□□□ -1.66
KRT9P35527 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRT9P35527 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRT9P35527 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.69□□□□□ -1.66
KRT9P35527 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.69□□□□□ -1.66
KRT9P35527 ZNF29P-201ENST00000225587 168 ntBASIC4.69□□□□□ -1.66
KRT9P35527 RNA5SP443-201ENST00000363083 132 ntBASIC4.69□□□□□ -1.66
KRT9P35527 RNU6-251P-201ENST00000363235 104 ntBASIC4.69□□□□□ -1.66
KRT9P35527 SNORA72.3-201ENST00000365074 132 ntBASIC4.69□□□□□ -1.66
KRT9P35527 RNU6-356P-201ENST00000384140 107 ntBASIC4.69□□□□□ -1.66
KRT9P35527 HSPD1P16-201ENST00000402302 394 ntBASIC4.69□□□□□ -1.66
KRT9P35527 RNU6-584P-201ENST00000410350 95 ntBASIC4.69□□□□□ -1.66
KRT9P35527 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.69□□□□□ -1.66
KRT9P35527 AL161631.1-201ENST00000417933 486 ntBASIC4.69□□□□□ -1.66
KRT9P35527 AC092634.6-201ENST00000418558 192 ntBASIC4.69□□□□□ -1.66
KRT9P35527 AL139095.3-201ENST00000419672 1203 ntBASIC4.69□□□□□ -1.66
KRT9P35527 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.69□□□□□ -1.66
KRT9P35527 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.69□□□□□ -1.66
KRT9P35527 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.69□□□□□ -1.66
KRT9P35527 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.69□□□□□ -1.66
KRT9P35527 AC241584.1-201ENST00000438469 1241 ntBASIC4.69□□□□□ -1.66
KRT9P35527 ELOCP8-201ENST00000439309 332 ntBASIC4.69□□□□□ -1.66
KRT9P35527 ELOCP15-201ENST00000442090 332 ntBASIC4.69□□□□□ -1.66
KRT9P35527 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
KRT9P35527 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
KRT9P35527 AC053481.1-201ENST00000467217 306 ntBASIC4.69□□□□□ -1.66
KRT9P35527 RN7SL585P-201ENST00000470538 280 ntBASIC4.69□□□□□ -1.66
KRT9P35527 RPL23AP2-201ENST00000471227 466 ntBASIC4.69□□□□□ -1.66
KRT9P35527 TRAV31-201ENST00000502780 342 ntBASIC4.69□□□□□ -1.66
KRT9P35527 AC017037.1-201ENST00000508460 471 ntBASIC4.69□□□□□ -1.66
KRT9P35527 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.69□□□□□ -1.66
KRT9P35527 AC113347.3-201ENST00000509113 148 ntBASIC4.69□□□□□ -1.66
KRT9P35527 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.69□□□□□ -1.66
KRT9P35527 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.69□□□□□ -1.66
KRT9P35527 MTCYBP27-201ENST00000555160 670 ntBASIC4.69□□□□□ -1.66
KRT9P35527 MTND1P8-201ENST00000571424 950 ntBASIC4.69□□□□□ -1.66
KRT9P35527 AC079587.1-201ENST00000603846 277 ntBASIC4.69□□□□□ -1.66
KRT9P35527 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC4.69□□□□□ -1.66
KRT9P35527 AC068722.2-201ENST00000618734 544 ntBASIC4.69□□□□□ -1.66
KRT9P35527 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.69□□□□□ -1.66
KRT9P35527 AC007546.1-201ENST00000619452 559 ntBASIC4.69□□□□□ -1.66
KRT9P35527 RMST_9.1-201ENST00000619945 193 ntBASIC4.69□□□□□ -1.66
KRT9P35527 AL356121.2-201ENST00000624715 780 ntBASIC4.69□□□□□ -1.66
KRT9P35527 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.69□□□□□ -1.66
KRT9P35527 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.69□□□□□ -1.66
KRT9P35527 AC026634.1-201ENST00000634369 198 ntBASIC4.69□□□□□ -1.66
KRT9P35527 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
KRT9P35527 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.69□□□□□ -1.66
KRT9P35527 ZNF962P-201ENST00000443465 3140 ntBASIC4.69□□□□□ -1.66
KRT9P35527 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.69□□□□□ -1.66
KRT9P35527 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
KRT9P35527 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
KRT9P35527 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.68□□□□□ -1.66
KRT9P35527 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRT9P35527 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
KRT9P35527 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.68□□□□□ -1.66
KRT9P35527 MTND4P10-201ENST00000446199 1363 ntBASIC4.68□□□□□ -1.66
KRT9P35527 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRT9P35527 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
KRT9P35527 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
KRT9P35527 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
KRT9P35527 RNU6-492P-201ENST00000363035 104 ntBASIC4.68□□□□□ -1.66
KRT9P35527 RNU1-130P-201ENST00000363930 160 ntBASIC4.68□□□□□ -1.66
KRT9P35527 RNA5SP505-201ENST00000364748 108 ntBASIC4.68□□□□□ -1.66
KRT9P35527 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
KRT9P35527 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.68□□□□□ -1.66
KRT9P35527 NANOGP5-201ENST00000424456 877 ntBASIC4.68□□□□□ -1.66
KRT9P35527 RPEP3-201ENST00000425462 676 ntBASIC4.68□□□□□ -1.66
KRT9P35527 NIPA2P1-201ENST00000426223 976 ntBASIC4.68□□□□□ -1.66
KRT9P35527 RPL31P54-201ENST00000429803 370 ntBASIC4.68□□□□□ -1.66
KRT9P35527 AL132765.1-201ENST00000434165 553 ntBASIC4.68□□□□□ -1.66
KRT9P35527 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.68□□□□□ -1.66
KRT9P35527 RPL23AP33-201ENST00000442301 452 ntBASIC4.68□□□□□ -1.66
KRT9P35527 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
KRT9P35527 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.68□□□□□ -1.66
KRT9P35527 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.68□□□□□ -1.66
KRT9P35527 MTND2P28-201ENST00000457540 1044 ntBASIC4.68□□□□□ -1.66
KRT9P35527 RN7SL860P-201ENST00000473738 223 ntBASIC4.68□□□□□ -1.66
KRT9P35527 RPL23AP44-201ENST00000482216 473 ntBASIC4.68□□□□□ -1.66
KRT9P35527 RPS6P4-201ENST00000494693 758 ntBASIC4.68□□□□□ -1.66
KRT9P35527 AC104164.2-201ENST00000496953 495 ntBASIC4.68□□□□□ -1.66
KRT9P35527 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.68□□□□□ -1.66
KRT9P35527 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.68□□□□□ -1.66
KRT9P35527 AK3P4-201ENST00000504283 583 ntBASIC4.68□□□□□ -1.66
KRT9P35527 AC111000.3-201ENST00000508057 576 ntBASIC4.68□□□□□ -1.66
KRT9P35527 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.68□□□□□ -1.66
KRT9P35527 SNORA48.10-201ENST00000516965 160 ntBASIC4.68□□□□□ -1.66
KRT9P35527 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.68□□□□□ -1.66
KRT9P35527 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.68□□□□□ -1.66
KRT9P35527 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms