Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
HOXD11P31277 GABRB3-201ENST00000299267 4494 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
HOXD11P31277 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
HOXD11P31277 CDH26-202ENST00000348616 3182 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
HOXD11P31277 EFTUD2-223ENST00000592576 3364 ntTSL 2 BASIC8.48□□□□□ -1.05
HOXD11P31277 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
HOXD11P31277 SELP-202ENST00000367786 2402 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
HOXD11P31277 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
HOXD11P31277 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
HOXD11P31277 AC011815.1-201ENST00000586922 4382 ntTSL 2 BASIC8.48□□□□□ -1.05
HOXD11P31277 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
HOXD11P31277 AC079741.1-201ENST00000321498 212 ntBASIC8.48□□□□□ -1.05
HOXD11P31277 Y_RNA.341-201ENST00000365341 102 ntBASIC8.48□□□□□ -1.05
HOXD11P31277 RNU6-166P-201ENST00000384371 107 ntBASIC8.48□□□□□ -1.05
HOXD11P31277 Y_RNA.528-201ENST00000384575 108 ntBASIC8.48□□□□□ -1.05
HOXD11P31277 USP32P1-202ENST00000393005 3846 ntTSL 5 BASIC8.48□□□□□ -1.05
HOXD11P31277 AC009237.9-201ENST00000414800 347 ntBASIC8.48□□□□□ -1.05
HOXD11P31277 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
HOXD11P31277 OR7H1P-201ENST00000448965 922 ntBASIC8.48□□□□□ -1.05
HOXD11P31277 RPS29P16-201ENST00000452798 171 ntBASIC8.48□□□□□ -1.05
HOXD11P31277 KDM4A-AS1-205ENST00000453015 647 ntTSL 2 BASIC8.48□□□□□ -1.05
HOXD11P31277 AC010531.2-201ENST00000465012 153 ntBASIC8.48□□□□□ -1.05
HOXD11P31277 UQCRHP4-201ENST00000471686 272 ntBASIC8.48□□□□□ -1.05
HOXD11P31277 AC005017.1-201ENST00000482002 490 ntBASIC8.48□□□□□ -1.05
HOXD11P31277 PGAM1P9-201ENST00000503887 755 ntBASIC8.48□□□□□ -1.05
HOXD11P31277 RFPL4AP5-201ENST00000514977 504 ntBASIC8.48□□□□□ -1.05
HOXD11P31277 RNU6-158P-201ENST00000517104 100 ntBASIC8.48□□□□□ -1.05
HOXD11P31277 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC8.48□□□□□ -1.05
HOXD11P31277 AC037198.1-201ENST00000560769 281 ntTSL 3 BASIC8.48□□□□□ -1.05
HOXD11P31277 TBC1D29-204ENST00000584297 602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
HOXD11P31277 AC011477.1-201ENST00000591884 544 ntTSL 5 BASIC8.48□□□□□ -1.05
HOXD11P31277 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC8.48□□□□□ -1.05
HOXD11P31277 RNU6-94P-201ENST00000607728 107 ntBASIC8.48□□□□□ -1.05
HOXD11P31277 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC8.48□□□□□ -1.05
HOXD11P31277 MIR6862-1-201ENST00000613016 70 ntBASIC8.48□□□□□ -1.05
HOXD11P31277 MIR6862-2-201ENST00000614755 70 ntBASIC8.48□□□□□ -1.05
HOXD11P31277 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC8.48□□□□□ -1.05
HOXD11P31277 AC027309.3-201ENST00000623419 351 ntBASIC8.48□□□□□ -1.05
HOXD11P31277 RBBP8-205ENST00000399725 3260 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
HOXD11P31277 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
HOXD11P31277 KIF24-201ENST00000379174 5729 ntTSL 5 BASIC8.48□□□□□ -1.05
HOXD11P31277 SOCS4-204ENST00000555846 4110 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
HOXD11P31277 TYW1B-202ENST00000612372 1543 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
HOXD11P31277 OPALIN-205ENST00000536387 3392 ntTSL 3 BASIC8.48□□□□□ -1.05
HOXD11P31277 SLC6A15-201ENST00000266682 4879 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
HOXD11P31277 A4GNT-201ENST00000236709 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
HOXD11P31277 UPF2-202ENST00000357604 5193 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
HOXD11P31277 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
HOXD11P31277 PHLDB2-207ENST00000477695 5813 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
HOXD11P31277 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXD11P31277 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC8.47□□□□□ -1.05
HOXD11P31277 RSPRY1-201ENST00000394420 3547 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXD11P31277 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
HOXD11P31277 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HOXD11P31277 OSBPL3-202ENST00000396429 2707 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HOXD11P31277 AC009053.1-202ENST00000563377 2051 ntBASIC8.47□□□□□ -1.05
HOXD11P31277 PRICKLE2-AS1-201ENST00000482609 6505 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HOXD11P31277 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC8.47□□□□□ -1.05
HOXD11P31277 PTBP2-203ENST00000426398 3027 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXD11P31277 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HOXD11P31277 ZNF611-206ENST00000595798 2395 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HOXD11P31277 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXD11P31277 SAXO2-201ENST00000339465 3134 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXD11P31277 MIR1282-201ENST00000408865 101 ntBASIC8.47□□□□□ -1.05
HOXD11P31277 RNU6-855P-201ENST00000410395 104 ntBASIC8.47□□□□□ -1.05
HOXD11P31277 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC8.47□□□□□ -1.05
HOXD11P31277 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC8.47□□□□□ -1.05
HOXD11P31277 AC007679.3-201ENST00000434035 414 ntBASIC8.47□□□□□ -1.05
HOXD11P31277 AC123904.1-201ENST00000441072 368 ntBASIC8.47□□□□□ -1.05
HOXD11P31277 GPM6BP3-201ENST00000442797 145 ntBASIC8.47□□□□□ -1.05
HOXD11P31277 AC005020.1-201ENST00000455459 526 ntBASIC8.47□□□□□ -1.05
HOXD11P31277 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC8.47□□□□□ -1.05
HOXD11P31277 AC044810.1-201ENST00000480271 711 ntBASIC8.47□□□□□ -1.05
HOXD11P31277 AC022137.1-201ENST00000483735 151 ntBASIC8.47□□□□□ -1.05
HOXD11P31277 COX6B1P2-201ENST00000489624 230 ntBASIC8.47□□□□□ -1.05
HOXD11P31277 AC244505.1-201ENST00000502642 307 ntBASIC8.47□□□□□ -1.05
HOXD11P31277 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC8.47□□□□□ -1.05
HOXD11P31277 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC8.47□□□□□ -1.05
HOXD11P31277 RN7SKP21-201ENST00000516503 220 ntBASIC8.47□□□□□ -1.05
HOXD11P31277 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
HOXD11P31277 AC107016.1-201ENST00000550463 337 ntBASIC8.47□□□□□ -1.05
HOXD11P31277 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC8.47□□□□□ -1.05
HOXD11P31277 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC8.47□□□□□ -1.05
HOXD11P31277 AC027801.5-201ENST00000574365 416 ntTSL 3 BASIC8.47□□□□□ -1.05
HOXD11P31277 OR7A18P-201ENST00000600416 277 ntBASIC8.47□□□□□ -1.05
HOXD11P31277 AC131159.2-201ENST00000613236 702 ntBASIC8.47□□□□□ -1.05
HOXD11P31277 TTPAL-202ENST00000372904 6234 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXD11P31277 ZNF80-202ENST00000482457 2471 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
HOXD11P31277 IFT122-201ENST00000296266 4151 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
HOXD11P31277 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC8.47□□□□□ -1.05
HOXD11P31277 ANO2-202ENST00000356134 3717 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
HOXD11P31277 MAPK10-281ENST00000641170 3070 ntBASIC8.47□□□□□ -1.05
HOXD11P31277 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXD11P31277 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
HOXD11P31277 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
HOXD11P31277 CRX-201ENST00000221996 4470 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
HOXD11P31277 AMOTL1-202ENST00000317829 8844 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
HOXD11P31277 AC080128.1-201ENST00000474389 1917 ntBASIC8.46□□□□□ -1.05
HOXD11P31277 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
HOXD11P31277 FAM182A-201ENST00000376398 5070 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 141.2 ms