Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
VARSP26640 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VARSP26640 AC233263.6-201ENST00000631132 1963 ntBASIC6.55□□□□□ -1.36
VARSP26640 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VARSP26640 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VARSP26640 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.55□□□□□ -1.36
VARSP26640 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VARSP26640 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VARSP26640 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.55□□□□□ -1.36
VARSP26640 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
VARSP26640 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VARSP26640 OR10R3P-201ENST00000361688 942 ntBASIC6.55□□□□□ -1.36
VARSP26640 RNA5SP333-201ENST00000363466 118 ntBASIC6.55□□□□□ -1.36
VARSP26640 U3.11-201ENST00000364476 212 ntBASIC6.55□□□□□ -1.36
VARSP26640 RNA5SP334-201ENST00000364825 118 ntBASIC6.55□□□□□ -1.36
VARSP26640 AC092634.1-201ENST00000366505 199 ntBASIC6.55□□□□□ -1.36
VARSP26640 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.55□□□□□ -1.36
VARSP26640 Y_RNA.424-201ENST00000384063 103 ntBASIC6.55□□□□□ -1.36
VARSP26640 SNORA11.3-201ENST00000408471 128 ntBASIC6.55□□□□□ -1.36
VARSP26640 RNU6-1050P-201ENST00000410388 107 ntBASIC6.55□□□□□ -1.36
VARSP26640 RPS17P17-201ENST00000419392 409 ntBASIC6.55□□□□□ -1.36
VARSP26640 E2F6P2-201ENST00000420708 748 ntBASIC6.55□□□□□ -1.36
VARSP26640 AC139712.2-201ENST00000424302 339 ntBASIC6.55□□□□□ -1.36
VARSP26640 CEP57L1P1-201ENST00000430943 1201 ntBASIC6.55□□□□□ -1.36
VARSP26640 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.55□□□□□ -1.36
VARSP26640 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VARSP26640 CRYGGP-201ENST00000443337 145 ntBASIC6.55□□□□□ -1.36
VARSP26640 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.55□□□□□ -1.36
VARSP26640 HMGB1P4-201ENST00000455362 567 ntBASIC6.55□□□□□ -1.36
VARSP26640 RN7SL390P-201ENST00000470634 284 ntBASIC6.55□□□□□ -1.36
VARSP26640 RN7SL216P-201ENST00000471607 298 ntBASIC6.55□□□□□ -1.36
VARSP26640 AC098818.1-201ENST00000478593 252 ntBASIC6.55□□□□□ -1.36
VARSP26640 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.55□□□□□ -1.36
VARSP26640 RN7SL561P-201ENST00000488553 281 ntBASIC6.55□□□□□ -1.36
VARSP26640 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.55□□□□□ -1.36
VARSP26640 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
VARSP26640 AC093815.1-201ENST00000508637 280 ntBASIC6.55□□□□□ -1.36
VARSP26640 Y_RNA.670-201ENST00000516255 105 ntBASIC6.55□□□□□ -1.36
VARSP26640 RN7SKP183-201ENST00000517169 324 ntBASIC6.55□□□□□ -1.36
VARSP26640 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.55□□□□□ -1.36
VARSP26640 OR4P1P-201ENST00000530808 1136 ntBASIC6.55□□□□□ -1.36
VARSP26640 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.55□□□□□ -1.36
VARSP26640 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.55□□□□□ -1.36
VARSP26640 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.55□□□□□ -1.36
VARSP26640 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.55□□□□□ -1.36
VARSP26640 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.55□□□□□ -1.36
VARSP26640 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC6.55□□□□□ -1.36
VARSP26640 AC024267.2-201ENST00000582737 417 ntBASIC6.55□□□□□ -1.36
VARSP26640 IGHV3-29-201ENST00000604817 344 ntBASIC6.55□□□□□ -1.36
VARSP26640 DLEU2_5.1-201ENST00000615567 84 ntBASIC6.55□□□□□ -1.36
VARSP26640 SNORA11.6-201ENST00000619030 128 ntBASIC6.55□□□□□ -1.36
VARSP26640 AL354718.1-201ENST00000619764 589 ntBASIC6.55□□□□□ -1.36
VARSP26640 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.55□□□□□ -1.36
VARSP26640 AL355480.1-201ENST00000629041 99 ntBASIC6.55□□□□□ -1.36
VARSP26640 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VARSP26640 AC005225.5-201ENST00000623547 2225 ntBASIC6.55□□□□□ -1.36
VARSP26640 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
VARSP26640 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VARSP26640 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
VARSP26640 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
VARSP26640 AC009120.2-204ENST00000621548 2032 ntBASIC6.55□□□□□ -1.36
VARSP26640 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
VARSP26640 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.55□□□□□ -1.36
VARSP26640 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
VARSP26640 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
VARSP26640 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VARSP26640 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
VARSP26640 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
VARSP26640 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
VARSP26640 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.54□□□□□ -1.36
VARSP26640 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
VARSP26640 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
VARSP26640 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.54□□□□□ -1.36
VARSP26640 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
VARSP26640 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
VARSP26640 SNORA70.3-201ENST00000365075 132 ntBASIC6.54□□□□□ -1.36
VARSP26640 Y_RNA.477-201ENST00000384352 108 ntBASIC6.54□□□□□ -1.36
VARSP26640 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
VARSP26640 AC026310.1-201ENST00000396004 378 ntBASIC6.54□□□□□ -1.36
VARSP26640 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC6.54□□□□□ -1.36
VARSP26640 HMGB3P7-201ENST00000400214 611 ntBASIC6.54□□□□□ -1.36
VARSP26640 MIR450B-201ENST00000401182 78 ntBASIC6.54□□□□□ -1.36
VARSP26640 RN7SKP205-201ENST00000410999 307 ntBASIC6.54□□□□□ -1.36
VARSP26640 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6.54□□□□□ -1.36
VARSP26640 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
VARSP26640 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.54□□□□□ -1.36
VARSP26640 RPS15AP10-201ENST00000432472 382 ntBASIC6.54□□□□□ -1.36
VARSP26640 AL590128.1-201ENST00000433407 286 ntBASIC6.54□□□□□ -1.36
VARSP26640 LINC00328-2P-201ENST00000436585 219 ntBASIC6.54□□□□□ -1.36
VARSP26640 AC092013.1-201ENST00000438795 332 ntBASIC6.54□□□□□ -1.36
VARSP26640 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC6.54□□□□□ -1.36
VARSP26640 HMGB3P30-201ENST00000457863 606 ntBASIC6.54□□□□□ -1.36
VARSP26640 RN7SL654P-201ENST00000479178 292 ntBASIC6.54□□□□□ -1.36
VARSP26640 AC009567.2-201ENST00000502989 349 ntBASIC6.54□□□□□ -1.36
VARSP26640 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC6.54□□□□□ -1.36
VARSP26640 SNX18P23-201ENST00000510867 677 ntBASIC6.54□□□□□ -1.36
VARSP26640 RNU6-120P-201ENST00000516077 103 ntBASIC6.54□□□□□ -1.36
VARSP26640 RNU6-1023P-201ENST00000516137 106 ntBASIC6.54□□□□□ -1.36
VARSP26640 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.54□□□□□ -1.36
VARSP26640 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms