Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.97□□□□□ -1.29
COL9A1P20849 GABPB2-202ENST00000368918 8964 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL9A1P20849 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL9A1P20849 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL9A1P20849 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
COL9A1P20849 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
COL9A1P20849 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
COL9A1P20849 BMX-201ENST00000342014 2499 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
COL9A1P20849 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
COL9A1P20849 MAPK10-371ENST00000641952 5209 ntBASIC6.96□□□□□ -1.29
COL9A1P20849 TLR10-204ENST00000506111 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
COL9A1P20849 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.96□□□□□ -1.29
COL9A1P20849 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC6.96□□□□□ -1.29
COL9A1P20849 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
COL9A1P20849 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
COL9A1P20849 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC6.96□□□□□ -1.29
COL9A1P20849 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
COL9A1P20849 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
COL9A1P20849 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
COL9A1P20849 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
COL9A1P20849 NPHP1-201ENST00000316534 3756 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL9A1P20849 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC6.96□□□□□ -1.3
COL9A1P20849 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL9A1P20849 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC6.96□□□□□ -1.3
COL9A1P20849 MIR411-201ENST00000362239 96 ntBASIC6.96□□□□□ -1.3
COL9A1P20849 RNY1P16-201ENST00000363063 111 ntBASIC6.96□□□□□ -1.3
COL9A1P20849 RNU6-1317P-201ENST00000364582 104 ntBASIC6.96□□□□□ -1.3
COL9A1P20849 AL355375.1-201ENST00000405686 392 ntBASIC6.96□□□□□ -1.3
COL9A1P20849 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.96□□□□□ -1.3
COL9A1P20849 AL590128.1-201ENST00000433407 286 ntBASIC6.96□□□□□ -1.3
COL9A1P20849 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.96□□□□□ -1.3
COL9A1P20849 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.96□□□□□ -1.3
COL9A1P20849 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.96□□□□□ -1.3
COL9A1P20849 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.96□□□□□ -1.3
COL9A1P20849 AC098869.1-201ENST00000481627 292 ntBASIC6.96□□□□□ -1.3
COL9A1P20849 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC6.96□□□□□ -1.3
COL9A1P20849 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.96□□□□□ -1.3
COL9A1P20849 RNU6-798P-201ENST00000516912 103 ntBASIC6.96□□□□□ -1.3
COL9A1P20849 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC6.96□□□□□ -1.3
COL9A1P20849 AC063949.1-201ENST00000552900 865 ntBASIC6.96□□□□□ -1.3
COL9A1P20849 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC6.96□□□□□ -1.3
COL9A1P20849 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.96□□□□□ -1.3
COL9A1P20849 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.96□□□□□ -1.3
COL9A1P20849 MIR7155-201ENST00000615925 56 ntBASIC6.96□□□□□ -1.3
COL9A1P20849 AC061999.1-201ENST00000624454 177 ntBASIC6.96□□□□□ -1.3
COL9A1P20849 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL9A1P20849 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL9A1P20849 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL9A1P20849 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL9A1P20849 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC6.96□□□□□ -1.3
COL9A1P20849 AC129502.1-201ENST00000623261 1654 ntBASIC6.96□□□□□ -1.3
COL9A1P20849 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL9A1P20849 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
COL9A1P20849 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL9A1P20849 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
COL9A1P20849 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
COL9A1P20849 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL9A1P20849 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC6.95□□□□□ -1.3
COL9A1P20849 LPAL2-203ENST00000454031 2498 ntBASIC6.95□□□□□ -1.3
COL9A1P20849 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL9A1P20849 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL9A1P20849 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL9A1P20849 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.95□□□□□ -1.3
COL9A1P20849 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL9A1P20849 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.95□□□□□ -1.3
COL9A1P20849 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.95□□□□□ -1.3
COL9A1P20849 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL9A1P20849 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
COL9A1P20849 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL9A1P20849 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.95□□□□□ -1.3
COL9A1P20849 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL9A1P20849 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
COL9A1P20849 AC008555.1-201ENST00000561778 2757 ntBASIC6.95□□□□□ -1.3
COL9A1P20849 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL9A1P20849 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
COL9A1P20849 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.95□□□□□ -1.3
COL9A1P20849 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
COL9A1P20849 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
COL9A1P20849 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC6.95□□□□□ -1.3
COL9A1P20849 OR3A2-201ENST00000408891 1076 ntBASIC6.95□□□□□ -1.3
COL9A1P20849 RNA5SP107-201ENST00000411358 122 ntBASIC6.95□□□□□ -1.3
COL9A1P20849 RN7SKP293-201ENST00000411389 296 ntBASIC6.95□□□□□ -1.3
COL9A1P20849 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.95□□□□□ -1.3
COL9A1P20849 AL121916.1-201ENST00000429405 308 ntBASIC6.95□□□□□ -1.3
COL9A1P20849 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.95□□□□□ -1.3
COL9A1P20849 RPEP5-201ENST00000441137 268 ntBASIC6.95□□□□□ -1.3
COL9A1P20849 RNU7-187P-201ENST00000458985 68 ntBASIC6.95□□□□□ -1.3
COL9A1P20849 RNU7-169P-201ENST00000459456 61 ntBASIC6.95□□□□□ -1.3
COL9A1P20849 RPS27AP1-201ENST00000475545 471 ntBASIC6.95□□□□□ -1.3
COL9A1P20849 AC005726.1-201ENST00000494679 427 ntBASIC6.95□□□□□ -1.3
COL9A1P20849 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.95□□□□□ -1.3
COL9A1P20849 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC6.95□□□□□ -1.3
COL9A1P20849 AC093870.1-201ENST00000506837 213 ntBASIC6.95□□□□□ -1.3
COL9A1P20849 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.95□□□□□ -1.3
COL9A1P20849 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.95□□□□□ -1.3
COL9A1P20849 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC6.95□□□□□ -1.3
COL9A1P20849 RNA5SP278-201ENST00000517055 102 ntBASIC6.95□□□□□ -1.3
COL9A1P20849 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.95□□□□□ -1.3
COL9A1P20849 DEFB108E-201ENST00000524692 240 ntBASIC6.95□□□□□ -1.3
COL9A1P20849 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms