Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 OR11H4-201ENST00000315409 1082 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 SNORA31-201ENST00000362607 130 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 Y_RNA.110-201ENST00000363220 99 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 SNORD35B-201ENST00000363660 87 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 RNU1-85P-201ENST00000364127 164 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 GCNT6-201ENST00000379591 934 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 RNU6-441P-201ENST00000384545 106 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 MIR93-201ENST00000385024 80 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 RNU11-4P-201ENST00000391149 133 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 OR51A3P-201ENST00000413596 924 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 RPP40P1-201ENST00000426762 456 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 AC114973.1-201ENST00000429057 632 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 AL358472.1-201ENST00000431295 329 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 MRPL50P1-201ENST00000431951 384 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 AL158053.1-201ENST00000441503 453 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 CYCSP53-201ENST00000455540 265 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 NAP1L1P3-201ENST00000462291 880 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 MTCO1P35-201ENST00000515270 228 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 MTND1P6-201ENST00000523621 946 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 OR5D17P-201ENST00000531492 978 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 OR8K4P-201ENST00000534608 872 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 CR383656.14-201ENST00000551951 406 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 AL136520.1-202ENST00000555494 763 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 AC025627.2-201ENST00000576220 160 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 MIR4789-201ENST00000577469 82 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 AP002906.1-201ENST00000603405 233 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 IGHV3-29-201ENST00000604817 344 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 AC026368.1-201ENST00000614934 690 ntBASIC4.11□□□□□ -1.75
HLA-DPA1P20036 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.11□□□□□ -1.75
HLA-DPA1P20036 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DPA1P20036 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DPA1P20036 AC008725.1-201ENST00000605123 2263 ntBASIC4.1□□□□□ -1.75
HLA-DPA1P20036 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DPA1P20036 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DPA1P20036 RN7SKP227-201ENST00000364445 330 ntBASIC4.1□□□□□ -1.75
HLA-DPA1P20036 RNU6-932P-201ENST00000391108 106 ntBASIC4.1□□□□□ -1.75
HLA-DPA1P20036 RNA5SP104-201ENST00000410989 118 ntBASIC4.1□□□□□ -1.75
HLA-DPA1P20036 EI24P1-201ENST00000416584 867 ntBASIC4.1□□□□□ -1.75
HLA-DPA1P20036 AC096632.1-201ENST00000427395 310 ntBASIC4.1□□□□□ -1.75
HLA-DPA1P20036 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DPA1P20036 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DPA1P20036 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DPA1P20036 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.1□□□□□ -1.75
HLA-DPA1P20036 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DPA1P20036 RPS4XP4-201ENST00000443195 763 ntBASIC4.1□□□□□ -1.75
HLA-DPA1P20036 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DPA1P20036 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DPA1P20036 AC103987.1-201ENST00000473394 348 ntBASIC4.1□□□□□ -1.75
HLA-DPA1P20036 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DPA1P20036 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DPA1P20036 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DPA1P20036 AC092470.1-201ENST00000546187 132 ntBASIC4.1□□□□□ -1.75
HLA-DPA1P20036 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.1□□□□□ -1.75
HLA-DPA1P20036 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.1□□□□□ -1.75
HLA-DPA1P20036 RN7SL600P-201ENST00000581811 299 ntBASIC4.1□□□□□ -1.75
HLA-DPA1P20036 SNRPGP15-201ENST00000600149 222 ntBASIC4.1□□□□□ -1.75
HLA-DPA1P20036 AC025946.2-201ENST00000603398 234 ntBASIC4.1□□□□□ -1.75
HLA-DPA1P20036 AC009948.4-201ENST00000604692 675 ntBASIC4.1□□□□□ -1.75
HLA-DPA1P20036 AP005229.2-201ENST00000609980 697 ntBASIC4.1□□□□□ -1.75
HLA-DPA1P20036 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.1□□□□□ -1.75
HLA-DPA1P20036 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.1□□□□□ -1.75
HLA-DPA1P20036 MIR4278-201ENST00000636094 69 ntBASIC4.1□□□□□ -1.75
HLA-DPA1P20036 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
HLA-DPA1P20036 GABPAP-201ENST00000419271 1356 ntBASIC4.1□□□□□ -1.75
HLA-DPA1P20036 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms