Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.96□□□□□ -1.78
SNX3O60493 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX3O60493 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.96□□□□□ -1.78
SNX3O60493 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.96□□□□□ -1.78
SNX3O60493 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX3O60493 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX3O60493 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SNX3O60493 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX3O60493 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX3O60493 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.96□□□□□ -1.78
SNX3O60493 MTND3P13-201ENST00000574391 343 ntBASIC3.96□□□□□ -1.78
SNX3O60493 MIR4330-201ENST00000579077 105 ntBASIC3.96□□□□□ -1.78
SNX3O60493 AC091042.1-201ENST00000579213 173 ntBASIC3.96□□□□□ -1.78
SNX3O60493 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SNX3O60493 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.96□□□□□ -1.78
SNX3O60493 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.96□□□□□ -1.78
SNX3O60493 ELOCP28-201ENST00000590044 317 ntBASIC3.96□□□□□ -1.78
SNX3O60493 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.96□□□□□ -1.78
SNX3O60493 AC115286.1-201ENST00000604298 434 ntBASIC3.96□□□□□ -1.78
SNX3O60493 AP003973.1-201ENST00000604639 691 ntBASIC3.96□□□□□ -1.78
SNX3O60493 AL451044.1-201ENST00000604867 238 ntBASIC3.96□□□□□ -1.78
SNX3O60493 AC106052.1-201ENST00000608029 497 ntBASIC3.96□□□□□ -1.78
SNX3O60493 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SNX3O60493 AL591424.2-201ENST00000617023 128 ntBASIC3.96□□□□□ -1.78
SNX3O60493 MIR6826-201ENST00000617808 98 ntBASIC3.96□□□□□ -1.78
SNX3O60493 AL157770.1-201ENST00000623049 439 ntBASIC3.96□□□□□ -1.78
SNX3O60493 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.96□□□□□ -1.78
SNX3O60493 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SNX3O60493 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.96□□□□□ -1.78
SNX3O60493 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
SNX3O60493 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.95□□□□□ -1.78
SNX3O60493 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.95□□□□□ -1.78
SNX3O60493 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SNX3O60493 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SNX3O60493 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SNX3O60493 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SNX3O60493 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SNX3O60493 RNU6-444P-201ENST00000383988 108 ntBASIC3.95□□□□□ -1.78
SNX3O60493 SNORD116-23-201ENST00000384645 92 ntBASIC3.95□□□□□ -1.78
SNX3O60493 MIR217-201ENST00000384817 110 ntBASIC3.95□□□□□ -1.78
SNX3O60493 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SNX3O60493 AL139098.1-201ENST00000407291 389 ntBASIC3.95□□□□□ -1.78
SNX3O60493 MIR1183-201ENST00000408856 89 ntBASIC3.95□□□□□ -1.78
SNX3O60493 AC008280.1-201ENST00000418851 412 ntBASIC3.95□□□□□ -1.78
SNX3O60493 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.95□□□□□ -1.78
SNX3O60493 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.95□□□□□ -1.78
SNX3O60493 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.95□□□□□ -1.78
SNX3O60493 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.95□□□□□ -1.78
SNX3O60493 RPF2P1-201ENST00000424137 906 ntBASIC3.95□□□□□ -1.78
SNX3O60493 MTCO1P3-201ENST00000429327 192 ntBASIC3.95□□□□□ -1.78
SNX3O60493 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC3.95□□□□□ -1.78
SNX3O60493 NANOGP2-201ENST00000435391 727 ntBASIC3.95□□□□□ -1.78
SNX3O60493 AC006011.1-201ENST00000442758 349 ntBASIC3.95□□□□□ -1.78
SNX3O60493 RPL36AP15-201ENST00000444514 266 ntBASIC3.95□□□□□ -1.78
SNX3O60493 ARL2BPP10-201ENST00000446487 531 ntBASIC3.95□□□□□ -1.78
SNX3O60493 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SNX3O60493 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.95□□□□□ -1.78
SNX3O60493 RPL21P126-201ENST00000470049 478 ntBASIC3.95□□□□□ -1.78
SNX3O60493 RN7SL826P-201ENST00000479724 288 ntBASIC3.95□□□□□ -1.78
SNX3O60493 AC084024.2-201ENST00000503480 791 ntBASIC3.95□□□□□ -1.78
SNX3O60493 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.95□□□□□ -1.78
SNX3O60493 RN7SKP82-201ENST00000516786 223 ntBASIC3.95□□□□□ -1.78
SNX3O60493 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.95□□□□□ -1.78
SNX3O60493 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.95□□□□□ -1.78
SNX3O60493 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.95□□□□□ -1.78
SNX3O60493 MTND2P26-201ENST00000528255 1029 ntBASIC3.95□□□□□ -1.78
SNX3O60493 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.95□□□□□ -1.78
SNX3O60493 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.95□□□□□ -1.78
SNX3O60493 AL161713.1-201ENST00000555538 145 ntBASIC3.95□□□□□ -1.78
SNX3O60493 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.95□□□□□ -1.78
SNX3O60493 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC3.95□□□□□ -1.78
SNX3O60493 MIR4737-201ENST00000583979 81 ntBASIC3.95□□□□□ -1.78
SNX3O60493 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.95□□□□□ -1.78
SNX3O60493 AC068790.7-201ENST00000602347 528 ntBASIC3.95□□□□□ -1.78
SNX3O60493 AC008782.1-201ENST00000603386 430 ntBASIC3.95□□□□□ -1.78
SNX3O60493 AC009974.1-201ENST00000608881 455 ntBASIC3.95□□□□□ -1.78
SNX3O60493 FAM27D1-201ENST00000612308 341 ntBASIC3.95□□□□□ -1.78
SNX3O60493 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.95□□□□□ -1.78
SNX3O60493 AC091905.1-201ENST00000624400 311 ntBASIC3.95□□□□□ -1.78
SNX3O60493 OR1S1-201ENST00000624470 978 ntBASIC3.95□□□□□ -1.78
SNX3O60493 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.95□□□□□ -1.78
SNX3O60493 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SNX3O60493 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SNX3O60493 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SNX3O60493 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SNX3O60493 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNX3O60493 AL592437.2-201ENST00000421655 2434 ntBASIC3.94□□□□□ -1.78
SNX3O60493 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNX3O60493 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.94□□□□□ -1.78
SNX3O60493 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNX3O60493 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNX3O60493 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNX3O60493 HMGB1P5-201ENST00000255320 642 ntBASIC3.94□□□□□ -1.78
SNX3O60493 SNORD35B-201ENST00000363660 87 ntBASIC3.94□□□□□ -1.78
SNX3O60493 SNORD113.2-201ENST00000364166 89 ntBASIC3.94□□□□□ -1.78
SNX3O60493 HSPD1P16-201ENST00000402302 394 ntBASIC3.94□□□□□ -1.78
SNX3O60493 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.94□□□□□ -1.78
SNX3O60493 NUP35P2-201ENST00000416748 943 ntBASIC3.94□□□□□ -1.78
SNX3O60493 RPS3AP37-201ENST00000419176 745 ntBASIC3.94□□□□□ -1.78
SNX3O60493 UQCRBP1-201ENST00000421129 336 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms