Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 SFR1P1-201ENST00000403720 688 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 PTGES3P2-201ENST00000407942 482 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 RNU2-37P-201ENST00000410695 177 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 CYP4F29P-201ENST00000420685 446 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 COX6CP15-201ENST00000426313 211 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 AL390879.2-203ENST00000426943 1121 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 AL590762.3-201ENST00000436372 640 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 RPL23AP89-201ENST00000439324 255 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 MOB1AP2-201ENST00000446060 614 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 NPM1P49-201ENST00000448027 714 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 RPL9P32-201ENST00000464118 620 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 AC005726.1-201ENST00000494679 427 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 AP001086.1-201ENST00000494882 321 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 RPS27AP13-201ENST00000498403 237 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 OR5D17P-201ENST00000531492 978 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 AC136624.4-201ENST00000573044 370 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 BPTFP1-201ENST00000579209 492 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 HMGN2P28-201ENST00000606102 262 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 AC092653.1-201ENST00000608509 531 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 AL133383.2-201ENST00000622958 2336 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 AC106730.3-201ENST00000624568 641 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 OR52H1-202ENST00000641796 1061 ntBASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.91□□□□□ -1.78
CLCA3PQ9Y6N3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.9□□□□□ -1.78
CLCA3PQ9Y6N3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
CLCA3PQ9Y6N3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
CLCA3PQ9Y6N3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CLCA3PQ9Y6N3 ZNF849P-201ENST00000594711 1566 ntBASIC3.9□□□□□ -1.78
CLCA3PQ9Y6N3 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.9□□□□□ -1.78
CLCA3PQ9Y6N3 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
CLCA3PQ9Y6N3 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CLCA3PQ9Y6N3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 SNORD65C-201ENST00000390962 71 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 BX664727.1-201ENST00000416024 466 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 RSL24D1P6-201ENST00000426934 401 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AC096632.1-201ENST00000427395 310 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AC091390.1-201ENST00000433904 331 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 RPL21P112-201ENST00000434403 463 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 HMGB1P45-201ENST00000435986 653 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 RNA5SP246-201ENST00000458909 119 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 RN7SL860P-201ENST00000473738 223 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 RPL31P13-201ENST00000484151 370 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 NCOR1P1-202ENST00000486162 291 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AC008628.1-201ENST00000508663 265 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AC005798.1-201ENST00000513715 387 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 RNU6-416P-201ENST00000516265 103 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AP003049.1-201ENST00000529418 457 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AC063950.1-201ENST00000552036 308 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AC022655.2-201ENST00000577280 318 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AC006116.5-201ENST00000591936 559 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AP002906.1-201ENST00000603405 233 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AC105227.2-201ENST00000615075 605 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AL359715.5-201ENST00000623431 443 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 AC090506.2-201ENST00000624521 419 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 MIR4278-201ENST00000636094 69 ntBASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.9□□□□□ -1.79
CLCA3PQ9Y6N3 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms