Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 COX6CP8-201ENST00000522620 226 ntBASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 AP004607.2-201ENST00000533949 322 ntBASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 OR6C7P-201ENST00000547875 934 ntBASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 OR1F2P-201ENST00000570470 933 ntBASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 AC053481.3-201ENST00000577881 843 ntBASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 AC068790.6-201ENST00000602558 258 ntBASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 AL355812.1-201ENST00000603215 216 ntBASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 AC010857.1-201ENST00000606398 594 ntBASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 AC099494.2-201ENST00000623371 978 ntBASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 AP001784.1-201ENST00000624107 428 ntBASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 AC093591.3-201ENST00000634516 308 ntBASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 AC084035.1-201ENST00000634543 607 ntBASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 EIF2AP4-201ENST00000424793 1781 ntBASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 AL592437.2-201ENST00000421655 2434 ntBASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHGA6Q9Y5G7 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.61
PCDHGA6Q9Y5G7 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 DCAF13P1-201ENST00000495256 1330 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 THAP12P5-201ENST00000405864 2275 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 RNU6-952P-201ENST00000391164 108 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 OR6C69P-201ENST00000394268 893 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 OR4K12P-201ENST00000406538 961 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 RNU2-16P-201ENST00000410712 136 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 RPL12P9-201ENST00000412942 488 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 OR4F13P-201ENST00000428478 931 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AC004980.3-201ENST00000447046 365 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 EPS15P1-201ENST00000448836 336 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 ARL2BPP4-201ENST00000506854 471 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 RNA5SP373-201ENST00000517271 95 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AC025881.1-201ENST00000518851 512 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 OR5AP1P-201ENST00000529730 940 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AL391156.1-201ENST00000554965 554 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AC068446.3-201ENST00000555285 382 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AGGF1P4-201ENST00000568249 801 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 LARP7P2-201ENST00000575306 125 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AC011840.5-201ENST00000582125 771 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 RN7SL356P-201ENST00000582228 248 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AC006272.2-201ENST00000594725 163 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AC080078.2-201ENST00000603766 501 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AL009028.1-201ENST00000604895 802 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AC097468.3-201ENST00000607956 456 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AC090116.1-201ENST00000615679 446 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AC009509.4-201ENST00000619202 509 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AL445264.1-201ENST00000621719 171 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AC073869.8-201ENST00000641806 335 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AC092104.1-201ENST00000497346 1441 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 AC022893.2-201ENST00000564832 3296 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 ZNF33CP-201ENST00000432492 2030 ntBASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
PCDHGA6Q9Y5G7 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.01□□□□□ -1.61
PCDHGA6Q9Y5G7 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA6Q9Y5G7 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.01□□□□□ -1.61
PCDHGA6Q9Y5G7 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA6Q9Y5G7 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.01□□□□□ -1.61
PCDHGA6Q9Y5G7 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PCDHGA6Q9Y5G7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA6Q9Y5G7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA6Q9Y5G7 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PCDHGA6Q9Y5G7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PCDHGA6Q9Y5G7 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PCDHGA6Q9Y5G7 OR10J6P-201ENST00000289731 930 ntBASIC5.01□□□□□ -1.61
PCDHGA6Q9Y5G7 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms