Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.22□□□□□ -1.73
PCDHB16Q9NRJ7 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PCDHB16Q9NRJ7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
PCDHB16Q9NRJ7 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.22□□□□□ -1.73
PCDHB16Q9NRJ7 OR5BR1P-201ENST00000524992 1330 ntBASIC4.21□□□□□ -1.73
PCDHB16Q9NRJ7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
PCDHB16Q9NRJ7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
PCDHB16Q9NRJ7 PABPC1P6-201ENST00000445594 1829 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 AC097504.1-201ENST00000515103 2415 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 SNRPEP2-201ENST00000397592 279 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 RNA5SP104-201ENST00000410989 118 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 CKS1BP6-201ENST00000424932 240 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 AC073335.1-201ENST00000427776 363 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 RPS6P15-201ENST00000431996 751 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 AL451139.1-201ENST00000434718 346 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 AL163193.1-201ENST00000444895 788 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 Z80107.2-201ENST00000445127 392 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 MTND1P31-201ENST00000449206 961 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 AC108078.3-201ENST00000502633 489 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 PGAM1P13-201ENST00000507497 754 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 COX6B1P5-201ENST00000509843 249 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 AC026412.2-201ENST00000512270 1075 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 HNRNPKP5-201ENST00000515300 253 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 DEFB131D-201ENST00000526803 184 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 ZNF321P-202ENST00000550843 495 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 RN7SL753P-201ENST00000581238 290 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 AC011447.4-201ENST00000587562 111 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 AL031281.1-201ENST00000604049 488 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 OR6R2P-201ENST00000609216 300 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 MIR6862-1-201ENST00000613016 70 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 MIR6862-2-201ENST00000614755 70 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 AC090116.1-201ENST00000615679 446 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 AC073968.1-201ENST00000618594 637 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 OR6C71P-202ENST00000641886 1107 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 OR4G11P-202ENST00000642116 1414 ntBASIC4.21□□□□□ -1.74
PCDHB16Q9NRJ7 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 RNU6-339P-201ENST00000384310 107 ntBASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 MIR124-3-201ENST00000384866 87 ntBASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 RNA5SP56-201ENST00000410277 118 ntBASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 AL355433.1-201ENST00000422804 300 ntBASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 MTATP6P17-201ENST00000431030 672 ntBASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 OR52B5P-201ENST00000435337 951 ntBASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 RPS25P9-201ENST00000435591 252 ntBASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 AC004938.1-201ENST00000438468 308 ntBASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 AL606662.1-201ENST00000445763 553 ntBASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 ARPC3P5-201ENST00000448802 534 ntBASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 AL389915.2-201ENST00000454576 441 ntBASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 VN1R40P-201ENST00000455196 941 ntBASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 AL109741.2-201ENST00000455561 343 ntBASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 RPS17P2-201ENST00000461663 408 ntBASIC4.2□□□□□ -1.74
PCDHB16Q9NRJ7 AC097493.1-201ENST00000463958 372 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms