Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 HSPE1P8-201ENST00000406997 288 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 Z74696.2-201ENST00000436514 498 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 AL513321.1-201ENST00000441175 761 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 AC007000.2-201ENST00000442564 487 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 HSFY6P-201ENST00000445573 403 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 AL590399.6-201ENST00000446396 307 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 TPT1P12-201ENST00000448968 492 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 CEACAMP10-202ENST00000495431 496 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 AC108941.1-201ENST00000502853 530 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 AC103833.1-201ENST00000517442 172 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 AC010928.3-201ENST00000587712 541 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 AC015726.1-201ENST00000602353 681 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 YWHAQP7-201ENST00000603536 658 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 AL590392.1-201ENST00000604960 446 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 AL354760.1-201ENST00000608357 643 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 AC083809.1-201ENST00000615051 472 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 MIR1264-201ENST00000616374 69 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 STMN1P1-201ENST00000617809 440 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 AC024595.1-201ENST00000623088 387 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 GABPAP-201ENST00000419271 1356 ntBASIC3.88□□□□□ -1.79
LRRC40Q9H9A6 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 HSPA8P1-201ENST00000425843 1833 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AC068538.1-201ENST00000376856 336 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AC092745.2-202ENST00000411880 369 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 COX6CP17-201ENST00000421389 185 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 Z77249.1-201ENST00000444622 1175 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 CYCSP53-201ENST00000455540 265 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 HMGN2P7-201ENST00000456186 273 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 TPT1P3-201ENST00000492841 512 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AP001086.1-201ENST00000494882 321 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AC078918.1-201ENST00000498515 228 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 TMEM248P1-201ENST00000510579 951 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AC005921.1-201ENST00000510589 286 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AC023141.12-201ENST00000512399 199 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AC108064.1-201ENST00000513791 460 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 MTCO1P35-201ENST00000515270 228 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 HIGD1AP3-201ENST00000515857 278 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 RN7SKP209-201ENST00000516888 304 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AC104115.2-201ENST00000523026 687 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AP003717.3-201ENST00000544832 1180 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AGGF1P8-201ENST00000562979 1000 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AC027104.1-201ENST00000563702 681 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AC244505.7-201ENST00000599675 272 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 HMGN2P28-201ENST00000606102 262 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AC100814.1-201ENST00000606963 623 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AC018754.1-201ENST00000607486 925 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AC104307.1-201ENST00000616142 196 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 MTCO1P24-201ENST00000515438 1558 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 ASNSP1-204ENST00000641977 1664 ntBASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LRRC40Q9H9A6 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
LRRC40Q9H9A6 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.86□□□□□ -1.79
LRRC40Q9H9A6 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LRRC40Q9H9A6 AC016716.1-201ENST00000265882 708 ntBASIC3.86□□□□□ -1.79
LRRC40Q9H9A6 MIR423-201ENST00000362201 94 ntBASIC3.86□□□□□ -1.79
LRRC40Q9H9A6 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.86□□□□□ -1.79
LRRC40Q9H9A6 OR8F1P-201ENST00000425243 930 ntBASIC3.86□□□□□ -1.79
LRRC40Q9H9A6 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.86□□□□□ -1.79
LRRC40Q9H9A6 HIGD1AP12-201ENST00000427832 281 ntBASIC3.86□□□□□ -1.79
LRRC40Q9H9A6 AL117339.2-201ENST00000430475 180 ntBASIC3.86□□□□□ -1.79
LRRC40Q9H9A6 AC005189.1-201ENST00000431286 310 ntBASIC3.86□□□□□ -1.79
LRRC40Q9H9A6 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.86□□□□□ -1.79
LRRC40Q9H9A6 UBE2V1P5-201ENST00000440070 405 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms