Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.76□□□□□ -1.65
VRK1Q99986 LINC01963-201ENST00000562038 3148 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VRK1Q99986 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.76□□□□□ -1.65
VRK1Q99986 AL121886.1-201ENST00000358609 435 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.76□□□□□ -1.65
VRK1Q99986 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
VRK1Q99986 RNY4P24-201ENST00000362735 96 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VRK1Q99986 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.76□□□□□ -1.65
VRK1Q99986 Y_RNA.516-201ENST00000384541 124 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 SNORA40.3-201ENST00000390964 122 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 RNU6-248P-201ENST00000410720 107 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.76□□□□□ -1.65
VRK1Q99986 RPL35AP24-201ENST00000413846 330 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 MTCO2P5-201ENST00000422621 426 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.76□□□□□ -1.65
VRK1Q99986 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.76□□□□□ -1.65
VRK1Q99986 CYCSP6-201ENST00000434498 302 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 MTND1P4-201ENST00000435196 415 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.76□□□□□ -1.65
VRK1Q99986 RSU1P2-202ENST00000437884 485 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.76□□□□□ -1.65
VRK1Q99986 AC019185.1-201ENST00000442718 389 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 AL163193.1-201ENST00000444895 788 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 USP9YP12-201ENST00000450481 570 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.76□□□□□ -1.65
VRK1Q99986 BX322784.1-201ENST00000455793 1077 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 snoU109.1-201ENST00000459339 135 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.76□□□□□ -1.65
VRK1Q99986 RN7SL583P-201ENST00000475692 287 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 AC104563.1-201ENST00000476147 376 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 RN7SL30P-201ENST00000488416 306 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
VRK1Q99986 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.76□□□□□ -1.65
VRK1Q99986 AC008638.1-201ENST00000506035 866 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.76□□□□□ -1.65
VRK1Q99986 AC108064.1-201ENST00000513791 460 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.76□□□□□ -1.65
VRK1Q99986 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.76□□□□□ -1.65
VRK1Q99986 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.76□□□□□ -1.65
VRK1Q99986 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VRK1Q99986 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.76□□□□□ -1.65
VRK1Q99986 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.76□□□□□ -1.65
VRK1Q99986 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC4.76□□□□□ -1.65
VRK1Q99986 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.76□□□□□ -1.65
VRK1Q99986 AC127024.5-201ENST00000580085 462 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 MIR4311-201ENST00000580794 100 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 AC012616.1-201ENST00000600294 197 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.76□□□□□ -1.65
VRK1Q99986 AC006566.1-201ENST00000608943 513 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.76□□□□□ -1.65
VRK1Q99986 uc_338.7-201ENST00000621834 124 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 AC068137.3-201ENST00000639191 341 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 AC073869.6-201ENST00000640656 341 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 SAMMSON-227ENST00000642114 1199 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.76□□□□□ -1.65
VRK1Q99986 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VRK1Q99986 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
VRK1Q99986 AC079097.1-201ENST00000512187 1399 ntBASIC4.76□□□□□ -1.65
VRK1Q99986 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.76□□□□□ -1.65
VRK1Q99986 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VRK1Q99986 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
VRK1Q99986 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VRK1Q99986 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VRK1Q99986 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VRK1Q99986 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.75□□□□□ -1.65
VRK1Q99986 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
VRK1Q99986 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VRK1Q99986 AL450326.2-201ENST00000421913 1962 ntBASIC4.75□□□□□ -1.65
VRK1Q99986 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.75□□□□□ -1.65
VRK1Q99986 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.75□□□□□ -1.65
VRK1Q99986 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
VRK1Q99986 RNU6-297P-201ENST00000384636 107 ntBASIC4.75□□□□□ -1.65
VRK1Q99986 RNU1-77P-201ENST00000390868 162 ntBASIC4.75□□□□□ -1.65
VRK1Q99986 BTBD10P2-201ENST00000404779 676 ntBASIC4.75□□□□□ -1.65
VRK1Q99986 AL009179.1-201ENST00000406085 265 ntBASIC4.75□□□□□ -1.65
VRK1Q99986 CTSL3P-202ENST00000412179 788 ntBASIC4.75□□□□□ -1.65
VRK1Q99986 FCF1P9-201ENST00000412546 282 ntBASIC4.75□□□□□ -1.65
VRK1Q99986 RAD23BP2-201ENST00000416003 1207 ntBASIC4.75□□□□□ -1.65
VRK1Q99986 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
VRK1Q99986 USP9YP13-201ENST00000417797 480 ntBASIC4.75□□□□□ -1.65
VRK1Q99986 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
VRK1Q99986 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.75□□□□□ -1.65
VRK1Q99986 AL445669.1-201ENST00000426743 755 ntBASIC4.75□□□□□ -1.65
VRK1Q99986 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.75□□□□□ -1.65
VRK1Q99986 OR2B8P-201ENST00000432841 938 ntBASIC4.75□□□□□ -1.65
VRK1Q99986 RPS3AP54-201ENST00000435535 734 ntBASIC4.75□□□□□ -1.65
VRK1Q99986 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.75□□□□□ -1.65
VRK1Q99986 AC091862.1-201ENST00000438016 1100 ntBASIC4.75□□□□□ -1.65
VRK1Q99986 HSPE1P28-201ENST00000443139 211 ntBASIC4.75□□□□□ -1.65
VRK1Q99986 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.75□□□□□ -1.65
VRK1Q99986 AL136126.1-201ENST00000473603 402 ntBASIC4.75□□□□□ -1.65
VRK1Q99986 HMGB1P21-201ENST00000502313 581 ntBASIC4.75□□□□□ -1.65
VRK1Q99986 AC138853.1-201ENST00000503549 823 ntBASIC4.75□□□□□ -1.65
VRK1Q99986 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.75□□□□□ -1.65
VRK1Q99986 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms