Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC3.09□□□□□ -1.92
VPS13AQ96RL7 EEF1B2P7-201ENST00000451177 676 ntBASIC3.09□□□□□ -1.92
VPS13AQ96RL7 HSPE1P6-201ENST00000479457 291 ntBASIC3.09□□□□□ -1.92
VPS13AQ96RL7 AC017037.2-201ENST00000513850 890 ntBASIC3.09□□□□□ -1.92
VPS13AQ96RL7 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC3.09□□□□□ -1.92
VPS13AQ96RL7 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
VPS13AQ96RL7 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
VPS13AQ96RL7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
VPS13AQ96RL7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.09□□□□□ -1.92
VPS13AQ96RL7 AC046144.1-201ENST00000478559 1853 ntBASIC3.09□□□□□ -1.92
VPS13AQ96RL7 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 TRGV5P-201ENST00000419915 354 ntBASIC3.08□□□□□ -1.92
VPS13AQ96RL7 RPL23AP82-202ENST00000427528 469 ntBASIC3.08□□□□□ -1.92
VPS13AQ96RL7 AC096638.2-201ENST00000434965 711 ntBASIC3.08□□□□□ -1.92
VPS13AQ96RL7 CENPBD1P1-201ENST00000464061 469 ntBASIC3.08□□□□□ -1.92
VPS13AQ96RL7 NPM1P17-201ENST00000479221 602 ntBASIC3.08□□□□□ -1.92
VPS13AQ96RL7 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 AL732372.2-225ENST00000642124 456 ntBASIC3.08□□□□□ -1.92
VPS13AQ96RL7 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 RN7SKP244-201ENST00000516513 307 ntBASIC3.08□□□□□ -1.92
VPS13AQ96RL7 SCARNA20.6-201ENST00000517251 106 ntBASIC3.08□□□□□ -1.92
VPS13AQ96RL7 RAD21-204ENST00000518055 896 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 UBTFL9-201ENST00000534504 1148 ntBASIC3.08□□□□□ -1.92
VPS13AQ96RL7 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 SNORD39.4-201ENST00000620099 78 ntBASIC3.08□□□□□ -1.92
VPS13AQ96RL7 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 MIR622-201ENST00000638396 96 ntBASIC3.08□□□□□ -1.92
VPS13AQ96RL7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 AC017002.4-201ENST00000604721 1525 ntBASIC3.08□□□□□ -1.92
VPS13AQ96RL7 ASNSP1-201ENST00000518311 1939 ntBASIC3.08□□□□□ -1.92
VPS13AQ96RL7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 FTLP19-201ENST00000433300 394 ntBASIC3.08□□□□□ -1.92
VPS13AQ96RL7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 AC021205.1-201ENST00000468797 348 ntBASIC3.08□□□□□ -1.92
VPS13AQ96RL7 MRPS35P3-201ENST00000603189 709 ntBASIC3.08□□□□□ -1.92
VPS13AQ96RL7 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 OR51C1P-202ENST00000641159 1444 ntBASIC3.08□□□□□ -1.92
VPS13AQ96RL7 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.08□□□□□ -1.92
VPS13AQ96RL7 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VPS13AQ96RL7 AC092435.3-201ENST00000565538 3654 ntBASIC3.07□□□□□ -1.92
VPS13AQ96RL7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VPS13AQ96RL7 LINC02471-203ENST00000641941 4752 ntBASIC3.07□□□□□ -1.92
VPS13AQ96RL7 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
VPS13AQ96RL7 HIGD1AP13-201ENST00000509878 289 ntBASIC3.07□□□□□ -1.92
VPS13AQ96RL7 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VPS13AQ96RL7 AC233702.9-201ENST00000581528 203 ntBASIC3.07□□□□□ -1.92
VPS13AQ96RL7 AL356274.1-201ENST00000617064 410 ntBASIC3.07□□□□□ -1.92
VPS13AQ96RL7 AL512643.1-201ENST00000635735 524 ntBASIC3.07□□□□□ -1.92
VPS13AQ96RL7 MAPK10-286ENST00000641208 8747 ntBASIC3.07□□□□□ -1.92
VPS13AQ96RL7 AC005005.4-201ENST00000623789 16698 ntBASIC3.07□□□□□ -1.92
VPS13AQ96RL7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
VPS13AQ96RL7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.07□□□□□ -1.92
VPS13AQ96RL7 GSTM3P2-201ENST00000412746 530 ntBASIC3.07□□□□□ -1.92
VPS13AQ96RL7 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.07□□□□□ -1.92
VPS13AQ96RL7 RN7SL594P-201ENST00000470590 287 ntBASIC3.07□□□□□ -1.92
VPS13AQ96RL7 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC3.07□□□□□ -1.92
VPS13AQ96RL7 APOOP4-201ENST00000513530 597 ntBASIC3.07□□□□□ -1.92
VPS13AQ96RL7 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.07□□□□□ -1.92
VPS13AQ96RL7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
VPS13AQ96RL7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.07□□□□□ -1.92
VPS13AQ96RL7 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
VPS13AQ96RL7 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
VPS13AQ96RL7 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC3.07□□□□□ -1.92
VPS13AQ96RL7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.06□□□□□ -1.92
VPS13AQ96RL7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
VPS13AQ96RL7 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.06□□□□□ -1.92
VPS13AQ96RL7 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.06□□□□□ -1.92
VPS13AQ96RL7 SNORD109B-201ENST00000458961 67 ntBASIC3.06□□□□□ -1.92
VPS13AQ96RL7 SNORD109A-201ENST00000459128 67 ntBASIC3.06□□□□□ -1.92
VPS13AQ96RL7 AC079600.2-201ENST00000550076 130 ntBASIC3.06□□□□□ -1.92
VPS13AQ96RL7 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.06□□□□□ -1.92
VPS13AQ96RL7 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.06□□□□□ -1.92
VPS13AQ96RL7 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VPS13AQ96RL7 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS13AQ96RL7 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS13AQ96RL7 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.06□□□□□ -1.92
VPS13AQ96RL7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
VPS13AQ96RL7 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
VPS13AQ96RL7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.06□□□□□ -1.92
VPS13AQ96RL7 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.06□□□□□ -1.92
VPS13AQ96RL7 AC008565.1-201ENST00000509046 885 ntBASIC3.06□□□□□ -1.92
VPS13AQ96RL7 AC093524.1-201ENST00000564266 1094 ntBASIC3.06□□□□□ -1.92
VPS13AQ96RL7 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC3.06□□□□□ -1.92
VPS13AQ96RL7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms