Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RPL23AP29-201ENST00000397284 453 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 AL592291.1-201ENST00000403830 352 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.52□□□□□ -1.53
ERCC4Q92889 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ERCC4Q92889 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC5.52□□□□□ -1.53
ERCC4Q92889 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ERCC4Q92889 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.52□□□□□ -1.53
ERCC4Q92889 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
ERCC4Q92889 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.52□□□□□ -1.53
ERCC4Q92889 USP9YP35-201ENST00000435696 412 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 UBE2FP3-201ENST00000436366 524 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 CBX1P4-201ENST00000439415 457 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.52□□□□□ -1.53
ERCC4Q92889 FHP1-201ENST00000442741 703 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC5.52□□□□□ -1.53
ERCC4Q92889 AC000111.2-201ENST00000448200 210 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 AC243772.1-201ENST00000451620 410 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 SSXP1-201ENST00000453640 473 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ERCC4Q92889 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.52□□□□□ -1.53
ERCC4Q92889 RN7SL172P-201ENST00000460535 303 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 RPL30P9-201ENST00000465586 330 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 AC072052.1-201ENST00000496556 306 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 AC011352.3-201ENST00000505162 593 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 MRPS33P2-201ENST00000507850 322 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.52□□□□□ -1.53
ERCC4Q92889 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC5.52□□□□□ -1.53
ERCC4Q92889 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.52□□□□□ -1.53
ERCC4Q92889 RNU6-1178P-201ENST00000516674 107 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.52□□□□□ -1.53
ERCC4Q92889 IGKV2-36-201ENST00000519999 223 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ERCC4Q92889 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC5.52□□□□□ -1.53
ERCC4Q92889 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.52□□□□□ -1.53
ERCC4Q92889 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.52□□□□□ -1.53
ERCC4Q92889 GTF2IP22-201ENST00000554443 182 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
ERCC4Q92889 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.52□□□□□ -1.53
ERCC4Q92889 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.52□□□□□ -1.53
ERCC4Q92889 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC5.52□□□□□ -1.53
ERCC4Q92889 ANKRD36BP2-206ENST00000575193 1245 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 AC013244.1-201ENST00000604279 193 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 AP002360.4-201ENST00000606980 481 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 SNORD91B-202ENST00000608459 222 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 AC099494.2-201ENST00000623371 978 ntBASIC5.52□□□□□ -1.53
ERCC4Q92889 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.52□□□□□ -1.53
ERCC4Q92889 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ERCC4Q92889 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
ERCC4Q92889 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
ERCC4Q92889 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
ERCC4Q92889 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
ERCC4Q92889 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
ERCC4Q92889 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
ERCC4Q92889 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
ERCC4Q92889 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
ERCC4Q92889 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ERCC4Q92889 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.51□□□□□ -1.53
ERCC4Q92889 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
ERCC4Q92889 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ERCC4Q92889 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
ERCC4Q92889 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
ERCC4Q92889 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.51□□□□□ -1.53
ERCC4Q92889 RPL21P132-201ENST00000331267 462 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.51□□□□□ -1.53
ERCC4Q92889 RNU6-492P-201ENST00000363035 104 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.51□□□□□ -1.53
ERCC4Q92889 RNU6-1151P-201ENST00000384684 107 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.51□□□□□ -1.53
ERCC4Q92889 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.51□□□□□ -1.53
ERCC4Q92889 AF186996.5-201ENST00000418098 904 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.51□□□□□ -1.53
ERCC4Q92889 AC048351.1-201ENST00000420064 602 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 LINC00993-201ENST00000420453 540 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 E2F6P2-201ENST00000420708 748 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AC062016.2-201ENST00000420950 676 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 MTND4LP11-201ENST00000422184 280 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.51□□□□□ -1.53
ERCC4Q92889 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.51□□□□□ -1.53
ERCC4Q92889 OR2B8P-201ENST00000432841 938 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.51□□□□□ -1.53
ERCC4Q92889 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.51□□□□□ -1.53
ERCC4Q92889 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.51□□□□□ -1.53
ERCC4Q92889 MTND1P28-201ENST00000435623 950 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AL627308.1-201ENST00000435693 821 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.51□□□□□ -1.53
ERCC4Q92889 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC5.51□□□□□ -1.53
ERCC4Q92889 COX6CP12-201ENST00000446748 202 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AL354714.3-201ENST00000447284 493 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.51□□□□□ -1.53
ERCC4Q92889 RPL21P71-201ENST00000465598 459 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AC079841.1-201ENST00000481228 950 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC5.51□□□□□ -1.53
ERCC4Q92889 HMGN2P25-201ENST00000486956 268 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC5.51□□□□□ -1.53
ERCC4Q92889 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.51□□□□□ -1.53
ERCC4Q92889 AC006499.3-201ENST00000506077 748 ntBASIC5.51□□□□□ -1.53
ERCC4Q92889 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms