Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 SETP7-201ENST00000552169 453 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 OR11H5P-201ENST00000554039 926 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AC023043.2-201ENST00000589678 1026 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 U1.25-201ENST00000614085 162 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AL354718.1-201ENST00000619764 589 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AP001784.1-201ENST00000624107 428 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AL136313.1-201ENST00000624804 202 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AL356585.10-201ENST00000641883 123 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 AC015799.1-201ENST00000622996 3122 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 SAMMSON-210ENST00000641260 1308 ntBASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.21□□□□□ -1.42
DEPDC4Q8N2C3 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 Z97989.1-201ENST00000531702 2421 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AL442128.2-201ENST00000620246 1824 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AC011155.1-201ENST00000316512 456 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 SNORA24.1-201ENST00000384401 135 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 DBIP1-201ENST00000401435 260 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AL356057.3-201ENST00000402607 340 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 RN7SKP268-201ENST00000411107 316 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 RNA5SP280-201ENST00000411230 115 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 RNA5SP107-201ENST00000411358 122 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 VDAC1P9-201ENST00000412766 841 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AC113618.1-201ENST00000416747 285 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 ATG3P1-201ENST00000419507 911 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 ACTR3BP6-201ENST00000422332 1241 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 RPL7P46-201ENST00000425129 740 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AC092651.1-201ENST00000426110 312 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 CALM2P2-201ENST00000428512 440 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AC009518.3-201ENST00000438972 253 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AC011225.1-201ENST00000457751 369 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AC091982.1-202ENST00000473923 343 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 RN7SL518P-201ENST00000491887 280 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AC092349.1-201ENST00000504903 310 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 RNU6-1092P-201ENST00000516955 87 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AC009902.1-201ENST00000519351 183 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 IGHV3-57-201ENST00000520143 280 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 GLYATL1P4-201ENST00000529326 906 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 MIR4293-201ENST00000584305 78 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AC022893.3-201ENST00000607665 437 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 RMST_9.1-201ENST00000619945 193 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 TTK-211ENST00000627129 240 ntTSL 5 BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AC140479.4-205ENST00000636339 820 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AC135068.11-201ENST00000636378 921 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AC008013.2-202ENST00000637965 364 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 TPTE2P4-201ENST00000258589 1605 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 EXOC5P1-201ENST00000510543 1969 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AC022164.1-201ENST00000568767 2673 ntBASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.2□□□□□ -1.42
DEPDC4Q8N2C3 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
DEPDC4Q8N2C3 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms