Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 IPO8P1-201ENST00000455509 3109 ntBASIC2.61□□□□□ -1.99
CSMD2Q7Z408 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CSMD2Q7Z408 DMD-205ENST00000359836 7339 ntTSL 5 BASIC2.61□□□□□ -1.99
CSMD2Q7Z408 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CSMD2Q7Z408 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CSMD2Q7Z408 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.61□□□□□ -1.99
CSMD2Q7Z408 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC2.61□□□□□ -1.99
CSMD2Q7Z408 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC2.6□□□□□ -1.99
CSMD2Q7Z408 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC2.6□□□□□ -1.99
CSMD2Q7Z408 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
CSMD2Q7Z408 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
CSMD2Q7Z408 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
CSMD2Q7Z408 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD2Q7Z408 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD2Q7Z408 NPM1P37-201ENST00000403105 874 ntBASIC2.6□□□□□ -1.99
CSMD2Q7Z408 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.6□□□□□ -1.99
CSMD2Q7Z408 AC004552.1-201ENST00000419089 348 ntBASIC2.6□□□□□ -1.99
CSMD2Q7Z408 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.6□□□□□ -1.99
CSMD2Q7Z408 RPS24P13-201ENST00000442520 397 ntBASIC2.6□□□□□ -1.99
CSMD2Q7Z408 AC016696.1-201ENST00000446949 318 ntBASIC2.6□□□□□ -1.99
CSMD2Q7Z408 RPL23AP23-201ENST00000452590 471 ntBASIC2.6□□□□□ -1.99
CSMD2Q7Z408 USP9YP2-201ENST00000504503 1000 ntBASIC2.6□□□□□ -1.99
CSMD2Q7Z408 AC017037.1-201ENST00000508460 471 ntBASIC2.6□□□□□ -1.99
CSMD2Q7Z408 USP9YP1-201ENST00000513521 1002 ntBASIC2.6□□□□□ -1.99
CSMD2Q7Z408 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC2.6□□□□□ -1.99
CSMD2Q7Z408 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.6□□□□□ -1.99
CSMD2Q7Z408 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC2.6□□□□□ -1.99
CSMD2Q7Z408 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
CSMD2Q7Z408 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD2Q7Z408 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD2Q7Z408 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD2Q7Z408 Z95114.1-201ENST00000624264 14574 ntBASIC2.6□□□□□ -1.99
CSMD2Q7Z408 MIR764-201ENST00000390811 85 ntBASIC2.6□□□□□ -1.99
CSMD2Q7Z408 AL645937.1-202ENST00000421799 937 ntBASIC2.6□□□□□ -1.99
CSMD2Q7Z408 AC007563.3-201ENST00000433233 371 ntBASIC2.6□□□□□ -1.99
CSMD2Q7Z408 NECAP1P2-201ENST00000455668 727 ntBASIC2.6□□□□□ -1.99
CSMD2Q7Z408 SCARNA20.6-201ENST00000517251 106 ntBASIC2.6□□□□□ -1.99
CSMD2Q7Z408 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.6□□□□□ -1.99
CSMD2Q7Z408 BNIP3P8-201ENST00000597863 560 ntBASIC2.6□□□□□ -1.99
CSMD2Q7Z408 AL157817.1-201ENST00000614264 790 ntBASIC2.6□□□□□ -1.99
CSMD2Q7Z408 AC099063.3-201ENST00000642066 185 ntBASIC2.6□□□□□ -1.99
CSMD2Q7Z408 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CSMD2Q7Z408 DDX18P4-201ENST00000511690 1966 ntBASIC2.6□□□□□ -1.99
CSMD2Q7Z408 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC2.6□□□□□ -1.99
CSMD2Q7Z408 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC2.6□□□□□ -1.99
CSMD2Q7Z408 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
CSMD2Q7Z408 MIR1289-2-201ENST00000408360 111 ntBASIC2.59□□□□□ -1.99
CSMD2Q7Z408 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC2.59□□□□□ -1.99
CSMD2Q7Z408 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC2.59□□□□□ -1.99
CSMD2Q7Z408 RN7SKP116-201ENST00000516902 319 ntBASIC2.59□□□□□ -1.99
CSMD2Q7Z408 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.59□□□□□ -1.99
CSMD2Q7Z408 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC2.59□□□□□ -1.99
CSMD2Q7Z408 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.59□□□□□ -1.99
CSMD2Q7Z408 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CSMD2Q7Z408 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CSMD2Q7Z408 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
CSMD2Q7Z408 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
CSMD2Q7Z408 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CSMD2Q7Z408 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC2.59□□□□□ -1.99
CSMD2Q7Z408 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CSMD2Q7Z408 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
CSMD2Q7Z408 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CSMD2Q7Z408 HDGFP1-201ENST00000405943 252 ntBASIC2.59□□□□□ -1.99
CSMD2Q7Z408 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.59□□□□□ -1.99
CSMD2Q7Z408 AL592148.1-201ENST00000413568 445 ntBASIC2.59□□□□□ -1.99
CSMD2Q7Z408 AC092809.1-201ENST00000441469 474 ntBASIC2.59□□□□□ -1.99
CSMD2Q7Z408 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC2.59□□□□□ -1.99
CSMD2Q7Z408 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.59□□□□□ -1.99
CSMD2Q7Z408 AC124856.1-201ENST00000600819 896 ntBASIC2.59□□□□□ -1.99
CSMD2Q7Z408 AC024153.1-201ENST00000603103 365 ntBASIC2.59□□□□□ -1.99
CSMD2Q7Z408 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CSMD2Q7Z408 MIR622-201ENST00000638396 96 ntBASIC2.59□□□□□ -1.99
CSMD2Q7Z408 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CSMD2Q7Z408 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.59□□□□□ -2
CSMD2Q7Z408 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.59□□□□□ -2
CSMD2Q7Z408 RN7SKP56-201ENST00000410513 331 ntBASIC2.59□□□□□ -2
CSMD2Q7Z408 EEF1B2P7-201ENST00000451177 676 ntBASIC2.59□□□□□ -2
CSMD2Q7Z408 HMGB3P22-202ENST00000451823 572 ntBASIC2.59□□□□□ -2
CSMD2Q7Z408 AC021205.1-201ENST00000468797 348 ntBASIC2.59□□□□□ -2
CSMD2Q7Z408 PCBP2P3-201ENST00000509726 843 ntBASIC2.59□□□□□ -2
CSMD2Q7Z408 AL358913.1-201ENST00000554342 121 ntBASIC2.59□□□□□ -2
CSMD2Q7Z408 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC2.59□□□□□ -2
CSMD2Q7Z408 AADACP1-206ENST00000561502 1193 ntBASIC2.59□□□□□ -2
CSMD2Q7Z408 LINC02471-203ENST00000641941 4752 ntBASIC2.59□□□□□ -2
CSMD2Q7Z408 RMST-202ENST00000541282 2099 ntTSL 2 BASIC2.59□□□□□ -2
CSMD2Q7Z408 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
CSMD2Q7Z408 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
CSMD2Q7Z408 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.58□□□□□ -2
CSMD2Q7Z408 SNORA71.1-201ENST00000364523 117 ntBASIC2.58□□□□□ -2
CSMD2Q7Z408 RNA5SP184-201ENST00000411071 108 ntBASIC2.58□□□□□ -2
CSMD2Q7Z408 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC2.58□□□□□ -2
CSMD2Q7Z408 UBE2V2P4-201ENST00000447495 259 ntBASIC2.58□□□□□ -2
CSMD2Q7Z408 AC008264.1-201ENST00000447612 367 ntBASIC2.58□□□□□ -2
CSMD2Q7Z408 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.58□□□□□ -2
CSMD2Q7Z408 AC009097.3-201ENST00000563557 1018 ntBASIC2.58□□□□□ -2
CSMD2Q7Z408 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC2.58□□□□□ -2
CSMD2Q7Z408 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.58□□□□□ -2
CSMD2Q7Z408 AC096947.1-201ENST00000603233 470 ntBASIC2.58□□□□□ -2
CSMD2Q7Z408 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.58□□□□□ -2
CSMD2Q7Z408 AP000641.1-201ENST00000531988 1639 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms