Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
VPS13CQ709C8 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC2.57□□□□□ -2
VPS13CQ709C8 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC2.57□□□□□ -2
VPS13CQ709C8 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC2.57□□□□□ -2
VPS13CQ709C8 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VPS13CQ709C8 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.57□□□□□ -2
VPS13CQ709C8 TRBV12-1-201ENST00000479785 344 ntBASIC2.57□□□□□ -2
VPS13CQ709C8 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC2.57□□□□□ -2
VPS13CQ709C8 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC2.57□□□□□ -2
VPS13CQ709C8 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.57□□□□□ -2
VPS13CQ709C8 AL590808.1-201ENST00000618696 141 ntBASIC2.57□□□□□ -2
VPS13CQ709C8 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC2.57□□□□□ -2
VPS13CQ709C8 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
VPS13CQ709C8 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC2.57□□□□□ -2
VPS13CQ709C8 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.57□□□□□ -2
VPS13CQ709C8 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC2.57□□□□□ -2
VPS13CQ709C8 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
VPS13CQ709C8 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.57□□□□□ -2
VPS13CQ709C8 AC012065.2-201ENST00000421295 375 ntBASIC2.57□□□□□ -2
VPS13CQ709C8 AC002075.2-201ENST00000425207 252 ntBASIC2.57□□□□□ -2
VPS13CQ709C8 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.57□□□□□ -2
VPS13CQ709C8 AC099560.2-201ENST00000457554 255 ntBASIC2.57□□□□□ -2
VPS13CQ709C8 PPP1R11P1-201ENST00000486095 376 ntBASIC2.57□□□□□ -2
VPS13CQ709C8 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC2.57□□□□□ -2
VPS13CQ709C8 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.57□□□□□ -2
VPS13CQ709C8 AC027176.1-201ENST00000560204 514 ntBASIC2.57□□□□□ -2
VPS13CQ709C8 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC2.57□□□□□ -2
VPS13CQ709C8 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC2.57□□□□□ -2
VPS13CQ709C8 MIR486-1-201ENST00000612171 68 ntBASIC2.57□□□□□ -2
VPS13CQ709C8 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.57□□□□□ -2
VPS13CQ709C8 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VPS13CQ709C8 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
VPS13CQ709C8 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VPS13CQ709C8 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC2.56□□□□□ -2
VPS13CQ709C8 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.56□□□□□ -2
VPS13CQ709C8 AL079342.1-201ENST00000401460 267 ntBASIC2.56□□□□□ -2
VPS13CQ709C8 HDGFP1-201ENST00000405943 252 ntBASIC2.56□□□□□ -2
VPS13CQ709C8 IFNNP1-201ENST00000429219 553 ntBASIC2.56□□□□□ -2
VPS13CQ709C8 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.56□□□□□ -2
VPS13CQ709C8 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC2.56□□□□□ -2
VPS13CQ709C8 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC2.56□□□□□ -2
VPS13CQ709C8 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
VPS13CQ709C8 ELOCP29-201ENST00000588193 334 ntBASIC2.56□□□□□ -2
VPS13CQ709C8 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC2.56□□□□□ -2
VPS13CQ709C8 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
VPS13CQ709C8 AP000641.1-201ENST00000531988 1639 ntBASIC2.56□□□□□ -2
VPS13CQ709C8 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VPS13CQ709C8 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
VPS13CQ709C8 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VPS13CQ709C8 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VPS13CQ709C8 MIR9-1-201ENST00000385198 89 ntBASIC2.56□□□□□ -2
VPS13CQ709C8 RN7SKP220-201ENST00000410611 288 ntBASIC2.56□□□□□ -2
VPS13CQ709C8 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.56□□□□□ -2
VPS13CQ709C8 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC2.56□□□□□ -2
VPS13CQ709C8 NAP1L1P2-201ENST00000414182 1089 ntBASIC2.56□□□□□ -2
VPS13CQ709C8 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC2.56□□□□□ -2
VPS13CQ709C8 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
VPS13CQ709C8 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC2.56□□□□□ -2
VPS13CQ709C8 AL162713.1-201ENST00000604480 262 ntBASIC2.56□□□□□ -2
VPS13CQ709C8 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC2.56□□□□□ -2
VPS13CQ709C8 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC2.56□□□□□ -2
VPS13CQ709C8 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
VPS13CQ709C8 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.56□□□□□ -2
VPS13CQ709C8 AC011266.1-201ENST00000624119 3569 ntBASIC2.56□□□□□ -2
VPS13CQ709C8 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
VPS13CQ709C8 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC2.56□□□□□ -2
VPS13CQ709C8 SNORD15B-201ENST00000384714 146 ntBASIC2.56□□□□□ -2
VPS13CQ709C8 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC2.56□□□□□ -2
VPS13CQ709C8 RN7SL371P-201ENST00000578099 267 ntBASIC2.56□□□□□ -2
VPS13CQ709C8 AC025754.2-201ENST00000606491 432 ntBASIC2.56□□□□□ -2
VPS13CQ709C8 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.56□□□□□ -2
VPS13CQ709C8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.56□□□□□ -2
VPS13CQ709C8 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC2.55□□□□□ -2
VPS13CQ709C8 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
VPS13CQ709C8 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC2.55□□□□□ -2
VPS13CQ709C8 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC2.55□□□□□ -2
VPS13CQ709C8 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.55□□□□□ -2
VPS13CQ709C8 MIR887-201ENST00000401258 79 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.55□□□□□ -2
VPS13CQ709C8 AC074367.1-201ENST00000438685 1125 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 AP000936.2-201ENST00000447151 681 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 NPM1P39-201ENST00000449818 867 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 FCF1P8-201ENST00000510322 597 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 AC079600.2-201ENST00000550076 130 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 AL592295.2-201ENST00000612578 206 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 ZNF90P1-201ENST00000480493 1951 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
VPS13CQ709C8 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC2.55□□□□□ -2
VPS13CQ709C8 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
VPS13CQ709C8 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
VPS13CQ709C8 AC004972.1-201ENST00000623934 2209 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC2.55□□□□□ -2
VPS13CQ709C8 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
VPS13CQ709C8 MIR512-1-201ENST00000384913 84 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 YWHAEP5-201ENST00000431545 765 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC2.55□□□□□ -2
VPS13CQ709C8 RNF148-202ENST00000447240 839 ntTSL 2 BASIC2.55□□□□□ -2
VPS13CQ709C8 UBE2V2P4-201ENST00000447495 259 ntBASIC2.55□□□□□ -2
VPS13CQ709C8 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC2.55□□□□□ -2
VPS13CQ709C8 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms