Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 AC087821.2-201ENST00000637086 450 ntBASIC4.27□□□□□ -1.73
TRNP1Q6NT89 MFSD8-245ENST00000641743 948 ntBASIC4.27□□□□□ -1.73
TRNP1Q6NT89 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
TRNP1Q6NT89 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
TRNP1Q6NT89 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRNP1Q6NT89 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.27□□□□□ -1.73
TRNP1Q6NT89 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRNP1Q6NT89 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TRNP1Q6NT89 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TRNP1Q6NT89 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TRNP1Q6NT89 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 LINC01355-201ENST00000566551 5444 ntBASIC4.26□□□□□ -1.73
TRNP1Q6NT89 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AC021242.1-201ENST00000507315 2035 ntBASIC4.26□□□□□ -1.73
TRNP1Q6NT89 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 OR11H4-201ENST00000315409 1082 ntBASIC4.26□□□□□ -1.73
TRNP1Q6NT89 Y_RNA.169-201ENST00000363745 96 ntBASIC4.26□□□□□ -1.73
TRNP1Q6NT89 RNU6-707P-201ENST00000364647 95 ntBASIC4.26□□□□□ -1.73
TRNP1Q6NT89 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AC093719.1-202ENST00000392735 373 ntBASIC4.26□□□□□ -1.73
TRNP1Q6NT89 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AL356095.1-201ENST00000417217 199 ntBASIC4.26□□□□□ -1.73
TRNP1Q6NT89 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AL009174.1-201ENST00000426577 416 ntBASIC4.26□□□□□ -1.73
TRNP1Q6NT89 RSL24D1P6-201ENST00000426934 401 ntBASIC4.26□□□□□ -1.73
TRNP1Q6NT89 RPS6P15-201ENST00000431996 751 ntBASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 RPS4XP4-201ENST00000443195 763 ntBASIC4.26□□□□□ -1.73
TRNP1Q6NT89 OR6K5P-201ENST00000447050 945 ntBASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 RPL7P19-201ENST00000469948 618 ntBASIC4.26□□□□□ -1.73
TRNP1Q6NT89 RPL23AP2-201ENST00000471227 466 ntBASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 OR5M7P-201ENST00000526140 972 ntBASIC4.26□□□□□ -1.73
TRNP1Q6NT89 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AC007834.2-201ENST00000536310 343 ntBASIC4.26□□□□□ -1.73
TRNP1Q6NT89 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 BNIP3P24-201ENST00000593398 557 ntBASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AL591034.3-201ENST00000605511 685 ntBASIC4.26□□□□□ -1.73
TRNP1Q6NT89 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AC010608.2-201ENST00000624830 470 ntBASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AC092608.3-201ENST00000625017 386 ntBASIC4.26□□□□□ -1.73
TRNP1Q6NT89 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TRNP1Q6NT89 AC009951.1-201ENST00000623674 2614 ntBASIC4.25□□□□□ -1.73
TRNP1Q6NT89 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 AC006042.3-201ENST00000454684 1469 ntBASIC4.25□□□□□ -1.73
TRNP1Q6NT89 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 RNA5SP443-201ENST00000363083 132 ntBASIC4.25□□□□□ -1.73
TRNP1Q6NT89 RNA5SP513-201ENST00000364648 118 ntBASIC4.25□□□□□ -1.73
TRNP1Q6NT89 SNORA62-201ENST00000365493 153 ntBASIC4.25□□□□□ -1.73
TRNP1Q6NT89 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 SNORD116-2-201ENST00000384274 95 ntBASIC4.25□□□□□ -1.73
TRNP1Q6NT89 SNORD116-6-201ENST00000384711 96 ntBASIC4.25□□□□□ -1.73
TRNP1Q6NT89 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 GSTA8P-201ENST00000404253 637 ntBASIC4.25□□□□□ -1.73
TRNP1Q6NT89 HSPE1P12-201ENST00000412576 301 ntBASIC4.25□□□□□ -1.73
TRNP1Q6NT89 AC107081.1-201ENST00000414975 361 ntBASIC4.25□□□□□ -1.73
TRNP1Q6NT89 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 MTND5P25-201ENST00000430499 799 ntBASIC4.25□□□□□ -1.73
TRNP1Q6NT89 MTCO3P21-201ENST00000430791 643 ntBASIC4.25□□□□□ -1.73
TRNP1Q6NT89 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 HMGB1P16-201ENST00000447155 540 ntBASIC4.25□□□□□ -1.73
TRNP1Q6NT89 AC104306.1-201ENST00000449702 371 ntBASIC4.25□□□□□ -1.73
TRNP1Q6NT89 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 MRPL35P4-201ENST00000453682 566 ntBASIC4.25□□□□□ -1.73
TRNP1Q6NT89 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.25□□□□□ -1.73
TRNP1Q6NT89 BX248409.1-201ENST00000455497 255 ntBASIC4.25□□□□□ -1.73
TRNP1Q6NT89 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms