Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.96□□□□□ -1.62
NEK3P51956 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.96□□□□□ -1.62
NEK3P51956 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.96□□□□□ -1.62
NEK3P51956 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.96□□□□□ -1.62
NEK3P51956 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.96□□□□□ -1.62
NEK3P51956 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.96□□□□□ -1.62
NEK3P51956 CLIC4P2-201ENST00000601934 717 ntBASIC4.96□□□□□ -1.62
NEK3P51956 SNORD91B-202ENST00000608459 222 ntBASIC4.96□□□□□ -1.62
NEK3P51956 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.96□□□□□ -1.62
NEK3P51956 AL354976.1-201ENST00000613843 387 ntBASIC4.96□□□□□ -1.62
NEK3P51956 AL049794.2-201ENST00000616301 365 ntBASIC4.96□□□□□ -1.62
NEK3P51956 U73479.1-201ENST00000618062 168 ntBASIC4.96□□□□□ -1.62
NEK3P51956 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.96□□□□□ -1.62
NEK3P51956 AC017037.3-201ENST00000625016 472 ntBASIC4.96□□□□□ -1.62
NEK3P51956 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.96□□□□□ -1.62
NEK3P51956 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
NEK3P51956 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.96□□□□□ -1.62
NEK3P51956 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
NEK3P51956 MTCO1P23-201ENST00000415223 1526 ntBASIC4.96□□□□□ -1.62
NEK3P51956 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.96□□□□□ -1.62
NEK3P51956 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.96□□□□□ -1.62
NEK3P51956 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.96□□□□□ -1.62
NEK3P51956 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
NEK3P51956 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.96□□□□□ -1.62
NEK3P51956 DDX18P5-201ENST00000534547 1306 ntBASIC4.96□□□□□ -1.62
NEK3P51956 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.96□□□□□ -1.62
NEK3P51956 SGO1P2-201ENST00000429458 1589 ntBASIC4.95□□□□□ -1.62
NEK3P51956 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NEK3P51956 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NEK3P51956 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
NEK3P51956 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NEK3P51956 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.95□□□□□ -1.62
NEK3P51956 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NEK3P51956 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NEK3P51956 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.95□□□□□ -1.62
NEK3P51956 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NEK3P51956 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
NEK3P51956 RNVU1-3-201ENST00000364313 161 ntBASIC4.95□□□□□ -1.62
NEK3P51956 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NEK3P51956 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NEK3P51956 AC016769.3-201ENST00000396562 315 ntBASIC4.95□□□□□ -1.62
NEK3P51956 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NEK3P51956 AL355379.1-201ENST00000405542 640 ntBASIC4.95□□□□□ -1.62
NEK3P51956 RNA5SP113-201ENST00000410486 84 ntBASIC4.95□□□□□ -1.62
NEK3P51956 MTCYBP38-201ENST00000417160 1123 ntBASIC4.95□□□□□ -1.62
NEK3P51956 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC4.95□□□□□ -1.62
NEK3P51956 RGS17P1-201ENST00000423358 553 ntBASIC4.95□□□□□ -1.62
NEK3P51956 ELOCP18-201ENST00000434209 337 ntBASIC4.95□□□□□ -1.62
NEK3P51956 AL356276.2-201ENST00000435919 558 ntBASIC4.95□□□□□ -1.62
NEK3P51956 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.95□□□□□ -1.62
NEK3P51956 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NEK3P51956 ARPC3P5-201ENST00000448802 534 ntBASIC4.95□□□□□ -1.62
NEK3P51956 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.95□□□□□ -1.62
NEK3P51956 RPL7P22-201ENST00000466005 733 ntBASIC4.95□□□□□ -1.62
NEK3P51956 AC108941.1-201ENST00000502853 530 ntBASIC4.95□□□□□ -1.62
NEK3P51956 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
NEK3P51956 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.95□□□□□ -1.62
NEK3P51956 XKRY-201ENST00000510392 1100 ntBASIC4.95□□□□□ -1.62
NEK3P51956 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
NEK3P51956 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.95□□□□□ -1.62
NEK3P51956 DEFB131D-201ENST00000526803 184 ntBASIC4.95□□□□□ -1.62
NEK3P51956 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.95□□□□□ -1.62
NEK3P51956 UBE2NP1-201ENST00000545592 458 ntBASIC4.95□□□□□ -1.62
NEK3P51956 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.95□□□□□ -1.62
NEK3P51956 UBE2FP2-201ENST00000566646 462 ntBASIC4.95□□□□□ -1.62
NEK3P51956 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.95□□□□□ -1.62
NEK3P51956 VN1R92P-201ENST00000598511 928 ntBASIC4.95□□□□□ -1.62
NEK3P51956 OR6R2P-201ENST00000609216 300 ntBASIC4.95□□□□□ -1.62
NEK3P51956 MIR6820-201ENST00000611508 62 ntBASIC4.95□□□□□ -1.62
NEK3P51956 AC090116.1-201ENST00000615679 446 ntBASIC4.95□□□□□ -1.62
NEK3P51956 AL136981.2-201ENST00000617319 734 ntBASIC4.95□□□□□ -1.62
NEK3P51956 AC091304.6-201ENST00000619761 202 ntBASIC4.95□□□□□ -1.62
NEK3P51956 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NEK3P51956 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.95□□□□□ -1.62
NEK3P51956 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.95□□□□□ -1.62
NEK3P51956 AC097655.1-201ENST00000635075 318 ntBASIC4.95□□□□□ -1.62
NEK3P51956 AL672167.1-203ENST00000641299 2975 ntBASIC4.95□□□□□ -1.62
NEK3P51956 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
NEK3P51956 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
NEK3P51956 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NEK3P51956 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NEK3P51956 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NEK3P51956 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NEK3P51956 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
NEK3P51956 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
NEK3P51956 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
NEK3P51956 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.94□□□□□ -1.62
NEK3P51956 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
NEK3P51956 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.94□□□□□ -1.62
NEK3P51956 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NEK3P51956 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.94□□□□□ -1.62
NEK3P51956 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
NEK3P51956 MIR124-3-201ENST00000384866 87 ntBASIC4.94□□□□□ -1.62
NEK3P51956 MT-TC-201ENST00000387405 66 ntBASIC4.94□□□□□ -1.62
NEK3P51956 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
NEK3P51956 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.94□□□□□ -1.62
NEK3P51956 USP9YP33-201ENST00000412220 421 ntBASIC4.94□□□□□ -1.62
NEK3P51956 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.94□□□□□ -1.62
NEK3P51956 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.94□□□□□ -1.62
NEK3P51956 AC012065.2-201ENST00000421295 375 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms