Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 RAD17-213ENST00000509734 3233 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
HOXD11P31277 FAM9C-201ENST00000333995 3361 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
HOXD11P31277 WDPCP-206ENST00000409562 3544 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
HOXD11P31277 OSBPL6-204ENST00000359685 7114 ntTSL 5 BASIC8.51□□□□□ -1.05
HOXD11P31277 GOSR2-220ENST00000638838 3266 ntAPPRIS ALT1 TSL 5 BASIC8.51□□□□□ -1.05
HOXD11P31277 MPZL3-201ENST00000278949 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
HOXD11P31277 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC8.51□□□□□ -1.05
HOXD11P31277 RAB3GAP1-203ENST00000442034 4185 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
HOXD11P31277 PPP2R1B-201ENST00000311129 2082 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
HOXD11P31277 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
HOXD11P31277 AC069222.1-201ENST00000608028 3360 ntBASIC8.5□□□□□ -1.05
HOXD11P31277 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HOXD11P31277 FIGNL1-211ENST00000611938 3543 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
HOXD11P31277 RABGAP1-202ENST00000373647 4997 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HOXD11P31277 EGFLAM-203ENST00000354891 3963 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
HOXD11P31277 ZNF35-202ENST00000396056 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HOXD11P31277 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC8.5□□□□□ -1.05
HOXD11P31277 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
HOXD11P31277 AL359693.1-201ENST00000614959 2407 ntBASIC8.5□□□□□ -1.05
HOXD11P31277 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HOXD11P31277 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
HOXD11P31277 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
HOXD11P31277 RNF41-201ENST00000345093 5596 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HOXD11P31277 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HOXD11P31277 Y_RNA.549-201ENST00000384657 102 ntBASIC8.5□□□□□ -1.05
HOXD11P31277 SNORA40C-201ENST00000391285 128 ntBASIC8.5□□□□□ -1.05
HOXD11P31277 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HOXD11P31277 AL691515.2-201ENST00000414765 466 ntTSL 3 BASIC8.5□□□□□ -1.05
HOXD11P31277 OR2AM1P-201ENST00000422137 422 ntBASIC8.5□□□□□ -1.05
HOXD11P31277 AL139327.3-201ENST00000433721 379 ntBASIC8.5□□□□□ -1.05
HOXD11P31277 AC144530.1-201ENST00000452862 555 ntBASIC8.5□□□□□ -1.05
HOXD11P31277 RPL39P39-201ENST00000455840 151 ntBASIC8.5□□□□□ -1.05
HOXD11P31277 RNU7-141P-201ENST00000459304 62 ntBASIC8.5□□□□□ -1.05
HOXD11P31277 AC021205.2-201ENST00000480069 347 ntBASIC8.5□□□□□ -1.05
HOXD11P31277 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC8.5□□□□□ -1.05
HOXD11P31277 AC137627.1-201ENST00000545761 289 ntBASIC8.5□□□□□ -1.05
HOXD11P31277 AC136624.4-201ENST00000573044 370 ntBASIC8.5□□□□□ -1.05
HOXD11P31277 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
HOXD11P31277 AC007998.3-202ENST00000591141 697 ntTSL 3 BASIC8.5□□□□□ -1.05
HOXD11P31277 ZDHHC6-205ENST00000626395 2906 ntTSL 5 BASIC8.5□□□□□ -1.05
HOXD11P31277 Metazoa_SRP.211-201ENST00000635920 276 ntBASIC8.5□□□□□ -1.05
HOXD11P31277 JADE1-203ENST00000452328 5544 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
HOXD11P31277 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HOXD11P31277 TMEM108-211ENST00000515826 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
HOXD11P31277 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
HOXD11P31277 AC127502.2-201ENST00000602663 2351 ntBASIC8.5□□□□□ -1.05
HOXD11P31277 CALML4-208ENST00000540479 4603 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HOXD11P31277 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC8.5□□□□□ -1.05
HOXD11P31277 AC245505.2-201ENST00000553572 3055 ntBASIC8.5□□□□□ -1.05
HOXD11P31277 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
HOXD11P31277 CUL2-204ENST00000374751 4233 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
HOXD11P31277 NCAPG2-203ENST00000409423 3957 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
HOXD11P31277 RN7SKP23-201ENST00000625159 4301 ntBASIC8.49□□□□□ -1.05
HOXD11P31277 SRPK2-202ENST00000393651 3650 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
HOXD11P31277 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
HOXD11P31277 LRRC37A4P-202ENST00000581296 5372 ntBASIC8.49□□□□□ -1.05
HOXD11P31277 BTK-201ENST00000308731 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
HOXD11P31277 SLC39A9-202ENST00000336643 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
HOXD11P31277 SIDT2-203ENST00000431081 3910 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
HOXD11P31277 SIDT2-219ENST00000620360 3924 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
HOXD11P31277 MICAL2-231ENST00000537344 3774 ntAPPRIS P3 TSL 5 BASIC8.49□□□□□ -1.05
HOXD11P31277 NDUFS1-202ENST00000423725 2631 ntTSL 2 BASIC8.49□□□□□ -1.05
HOXD11P31277 RNU6-978P-201ENST00000364371 103 ntBASIC8.49□□□□□ -1.05
HOXD11P31277 MIR137-201ENST00000385223 102 ntBASIC8.49□□□□□ -1.05
HOXD11P31277 Z82198.3-201ENST00000421145 199 ntBASIC8.49□□□□□ -1.05
HOXD11P31277 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
HOXD11P31277 AC000362.1-201ENST00000433725 425 ntBASIC8.49□□□□□ -1.05
HOXD11P31277 AL354710.1-201ENST00000453641 246 ntBASIC8.49□□□□□ -1.05
HOXD11P31277 AC004129.2-201ENST00000457229 287 ntBASIC8.49□□□□□ -1.05
HOXD11P31277 SNRPCP11-201ENST00000492453 205 ntBASIC8.49□□□□□ -1.05
HOXD11P31277 RN7SL653P-201ENST00000494134 293 ntBASIC8.49□□□□□ -1.05
HOXD11P31277 RN7SL182P-201ENST00000496499 300 ntBASIC8.49□□□□□ -1.05
HOXD11P31277 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC8.49□□□□□ -1.05
HOXD11P31277 AC000068.3-201ENST00000607934 427 ntBASIC8.49□□□□□ -1.05
HOXD11P31277 Y_RNA.818-201ENST00000618813 71 ntBASIC8.49□□□□□ -1.05
HOXD11P31277 AC130448.2-201ENST00000624082 374 ntBASIC8.49□□□□□ -1.05
HOXD11P31277 AC099667.1-201ENST00000624222 469 ntBASIC8.49□□□□□ -1.05
HOXD11P31277 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC8.49□□□□□ -1.05
HOXD11P31277 SLC11A2-203ENST00000394904 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
HOXD11P31277 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
HOXD11P31277 NCAM1-221ENST00000615112 5967 ntAPPRIS P5 TSL 5 BASIC8.49□□□□□ -1.05
HOXD11P31277 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
HOXD11P31277 ZMYND8-201ENST00000262975 4139 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
HOXD11P31277 ZNF185-204ENST00000370268 4305 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
HOXD11P31277 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC8.49□□□□□ -1.05
HOXD11P31277 MCC-209ENST00000515367 3844 ntTSL 5 BASIC8.49□□□□□ -1.05
HOXD11P31277 AC078795.1-201ENST00000602342 3143 ntBASIC8.49□□□□□ -1.05
HOXD11P31277 CCDC33-203ENST00000398814 2787 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
HOXD11P31277 NLRP1-210ENST00000572272 4422 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
HOXD11P31277 OPCML-207ENST00000541867 6277 ntTSL 5 BASIC8.49□□□□□ -1.05
HOXD11P31277 OPCML-208ENST00000612177 6250 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
HOXD11P31277 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC8.48□□□□□ -1.05
HOXD11P31277 DTL-206ENST00000542077 4471 ntTSL 2 BASIC8.48□□□□□ -1.05
HOXD11P31277 OFD1P17-201ENST00000437639 3018 ntBASIC8.48□□□□□ -1.05
HOXD11P31277 AP004147.1-201ENST00000505153 6314 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
HOXD11P31277 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
HOXD11P31277 RAD17-219ENST00000521422 2323 ntTSL 5 BASIC8.48□□□□□ -1.05
HOXD11P31277 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
HOXD11P31277 ACVR2A-207ENST00000535787 5166 ntTSL 2 BASIC8.48□□□□□ -1.05
HOXD11P31277 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 475.2 ms