Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXA13P31271 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXA13P31271 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXA13P31271 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
HOXA13P31271 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXA13P31271 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXA13P31271 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXA13P31271 AC016716.1-201ENST00000265882 708 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
HOXA13P31271 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXA13P31271 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXA13P31271 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
HOXA13P31271 AL445189.1-201ENST00000405722 338 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 ZNF602P-201ENST00000405929 924 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXA13P31271 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXA13P31271 AC092634.2-201ENST00000428146 1010 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXA13P31271 PTGES3P1-201ENST00000439531 483 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 AC004854.1-201ENST00000440356 349 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 HMGB3P9-201ENST00000441799 583 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 RPL23AP15-201ENST00000450202 459 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 NPM1P13-201ENST00000452663 865 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 RN7SL132P-201ENST00000478131 296 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 AC015724.1-201ENST00000478577 156 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 AC006517.1-201ENST00000480485 328 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 GAPDHP36-201ENST00000480688 918 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 AC011037.1-201ENST00000483964 558 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 AC108729.1-201ENST00000487812 947 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 RPL30P11-201ENST00000495304 339 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 AC146944.2-203ENST00000502493 354 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HOXA13P31271 AC139495.1-202ENST00000513164 354 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXA13P31271 RNA5SP179-201ENST00000517284 121 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXA13P31271 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.57□□□□□ -1.68
HOXA13P31271 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
HOXA13P31271 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXA13P31271 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXA13P31271 CYP4A43P-201ENST00000568156 121 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 AC233702.9-201ENST00000581528 203 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HOXA13P31271 MTCO2P2-201ENST00000591258 225 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.57□□□□□ -1.68
HOXA13P31271 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXA13P31271 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXA13P31271 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXA13P31271 AL583856.2-201ENST00000606298 543 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 AL008729.2-201ENST00000606393 473 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 PART1_2.1-201ENST00000612397 250 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 MIR7154-201ENST00000620673 73 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 AC091046.2-201ENST00000620775 665 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 AC006927.4-201ENST00000639187 543 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 AC138393.1-206ENST00000540997 1886 ntBASIC4.57□□□□□ -1.68
HOXA13P31271 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXA13P31271 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXA13P31271 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HOXA13P31271 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
HOXA13P31271 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXA13P31271 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
HOXA13P31271 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HOXA13P31271 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXA13P31271 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HOXA13P31271 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
HOXA13P31271 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
HOXA13P31271 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXA13P31271 RNU6-213P-201ENST00000384051 104 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 RNU6-584P-201ENST00000410350 95 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXA13P31271 CYCSP19-201ENST00000411715 316 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 AC073136.2-201ENST00000417282 849 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 AC106883.1-201ENST00000418805 562 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 AL009174.1-201ENST00000426577 416 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXA13P31271 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXA13P31271 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXA13P31271 Z80107.1-201ENST00000436830 412 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 AL357520.1-201ENST00000441557 453 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 AC096992.1-201ENST00000459808 709 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 RN7SL542P-201ENST00000467147 294 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXA13P31271 RN7SL585P-201ENST00000470538 280 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 RPS26P28-201ENST00000470806 348 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXA13P31271 AC020593.1-201ENST00000507399 299 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.56□□□□□ -1.68
HOXA13P31271 RNU6-352P-201ENST00000516908 107 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 OR8I1P-201ENST00000529291 931 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXA13P31271 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXA13P31271 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HOXA13P31271 SERPINE4P-201ENST00000554978 281 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.56□□□□□ -1.68
HOXA13P31271 AC124068.1-201ENST00000563131 678 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 AL049838.1-201ENST00000563647 981 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.56□□□□□ -1.68
HOXA13P31271 AL121834.1-201ENST00000572284 509 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 BPTFP1-201ENST00000579209 492 ntBASIC4.56□□□□□ -1.68
HOXA13P31271 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms