Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
COL6A2P12110 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL6A2P12110 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.33□□□□□ -1.56
COL6A2P12110 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
COL6A2P12110 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
COL6A2P12110 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL6A2P12110 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL6A2P12110 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL6A2P12110 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.33□□□□□ -1.56
COL6A2P12110 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL6A2P12110 PCAT14-202ENST00000627127 3935 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL6A2P12110 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.32□□□□□ -1.56
COL6A2P12110 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.32□□□□□ -1.56
COL6A2P12110 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL6A2P12110 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
COL6A2P12110 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL6A2P12110 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL6A2P12110 TMSB4XP4-201ENST00000323496 618 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 SNORA72.1-201ENST00000363485 129 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 RNU6-809P-201ENST00000384461 107 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
COL6A2P12110 RPL21P67-201ENST00000402896 478 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.32□□□□□ -1.56
COL6A2P12110 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.32□□□□□ -1.56
COL6A2P12110 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.32□□□□□ -1.56
COL6A2P12110 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC5.32□□□□□ -1.56
COL6A2P12110 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL6A2P12110 NPM1P34-201ENST00000428821 893 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 NFU1P2-201ENST00000448700 469 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
COL6A2P12110 COX6B1P2-201ENST00000489624 230 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
COL6A2P12110 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
COL6A2P12110 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.32□□□□□ -1.56
COL6A2P12110 AC093824.1-201ENST00000508796 343 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 SAP18P1-201ENST00000512058 390 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 RNU6-347P-201ENST00000516658 105 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 Y_RNA.702-201ENST00000516843 96 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 RNU6-1003P-201ENST00000517099 105 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC5.32□□□□□ -1.56
COL6A2P12110 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.32□□□□□ -1.56
COL6A2P12110 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.32□□□□□ -1.56
COL6A2P12110 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.32□□□□□ -1.56
COL6A2P12110 HSPA8P13-201ENST00000523715 472 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 AP001893.2-201ENST00000526949 202 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 OR5M2P-201ENST00000529003 936 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.32□□□□□ -1.56
COL6A2P12110 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.32□□□□□ -1.56
COL6A2P12110 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.32□□□□□ -1.56
COL6A2P12110 MIR3936-201ENST00000584304 110 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.32□□□□□ -1.56
COL6A2P12110 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.32□□□□□ -1.56
COL6A2P12110 AC022916.3-201ENST00000592961 742 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.32□□□□□ -1.56
COL6A2P12110 AL139286.1-201ENST00000604465 483 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL6A2P12110 AC129915.3-201ENST00000634128 948 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.32□□□□□ -1.56
COL6A2P12110 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.32□□□□□ -1.56
COL6A2P12110 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL6A2P12110 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.32□□□□□ -1.56
COL6A2P12110 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
COL6A2P12110 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.32□□□□□ -1.56
COL6A2P12110 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL6A2P12110 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
COL6A2P12110 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.32□□□□□ -1.56
COL6A2P12110 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.31□□□□□ -1.56
COL6A2P12110 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.31□□□□□ -1.56
COL6A2P12110 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL6A2P12110 OR11H5P-202ENST00000641612 1325 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
COL6A2P12110 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
COL6A2P12110 AC091305.2-201ENST00000624049 1576 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 OR52B3P-201ENST00000314715 928 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 AC005294.1-201ENST00000355509 281 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 RNU6-984P-201ENST00000363236 109 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.31□□□□□ -1.56
COL6A2P12110 Y_RNA.402-201ENST00000383972 102 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 RNU6-1103P-201ENST00000384150 107 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 AL133384.1-201ENST00000412744 351 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.31□□□□□ -1.56
COL6A2P12110 RPL12P9-201ENST00000412942 488 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 RPL34P3-201ENST00000421454 338 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.31□□□□□ -1.56
COL6A2P12110 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.31□□□□□ -1.56
COL6A2P12110 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.31□□□□□ -1.56
COL6A2P12110 MTND5P14-201ENST00000441481 1267 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 SNRPEP8-201ENST00000442866 260 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 AL512326.1-201ENST00000443050 721 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 RPS4XP4-201ENST00000443195 763 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.31□□□□□ -1.56
COL6A2P12110 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.31□□□□□ -1.56
COL6A2P12110 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.31□□□□□ -1.56
COL6A2P12110 HIGD1AP8-201ENST00000453927 274 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 AC079168.1-201ENST00000458741 345 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 AC012170.1-201ENST00000495139 359 ntBASIC5.31□□□□□ -1.56
COL6A2P12110 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.31□□□□□ -1.56
COL6A2P12110 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms