Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AL392112.1-201ENST00000605115 829 ntBASIC3.96□□□□□ -1.78
TPM1P09493 AC135803.1-201ENST00000608748 565 ntBASIC3.96□□□□□ -1.78
TPM1P09493 AC099778.2-201ENST00000610904 211 ntBASIC3.96□□□□□ -1.78
TPM1P09493 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
TPM1P09493 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.96□□□□□ -1.78
TPM1P09493 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.96□□□□□ -1.78
TPM1P09493 MIR492-201ENST00000638676 116 ntBASIC3.96□□□□□ -1.78
TPM1P09493 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TPM1P09493 AC068647.1-201ENST00000489539 2265 ntBASIC3.95□□□□□ -1.78
TPM1P09493 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
TPM1P09493 AC123912.3-201ENST00000600907 1367 ntBASIC3.95□□□□□ -1.78
TPM1P09493 MIR30E-201ENST00000362104 92 ntBASIC3.95□□□□□ -1.78
TPM1P09493 RNA5SP31-201ENST00000411144 127 ntBASIC3.95□□□□□ -1.78
TPM1P09493 AC068533.1-201ENST00000418542 415 ntBASIC3.95□□□□□ -1.78
TPM1P09493 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.95□□□□□ -1.78
TPM1P09493 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.95□□□□□ -1.78
TPM1P09493 AC125238.1-201ENST00000448842 249 ntBASIC3.95□□□□□ -1.78
TPM1P09493 OR9M1P-201ENST00000459641 921 ntBASIC3.95□□□□□ -1.78
TPM1P09493 RPS7P7-201ENST00000463499 571 ntBASIC3.95□□□□□ -1.78
TPM1P09493 RN7SL459P-201ENST00000481078 302 ntBASIC3.95□□□□□ -1.78
TPM1P09493 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.95□□□□□ -1.78
TPM1P09493 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.95□□□□□ -1.78
TPM1P09493 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.95□□□□□ -1.78
TPM1P09493 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.95□□□□□ -1.78
TPM1P09493 SOD1P3-201ENST00000518682 454 ntBASIC3.95□□□□□ -1.78
TPM1P09493 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.95□□□□□ -1.78
TPM1P09493 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.95□□□□□ -1.78
TPM1P09493 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.95□□□□□ -1.78
TPM1P09493 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TPM1P09493 OR5D17P-201ENST00000531492 978 ntBASIC3.95□□□□□ -1.78
TPM1P09493 CYCSP30-201ENST00000546447 172 ntBASIC3.95□□□□□ -1.78
TPM1P09493 AC004024.1-201ENST00000549244 247 ntBASIC3.95□□□□□ -1.78
TPM1P09493 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TPM1P09493 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.95□□□□□ -1.78
TPM1P09493 KPNA2P3-201ENST00000584190 848 ntBASIC3.95□□□□□ -1.78
TPM1P09493 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.95□□□□□ -1.78
TPM1P09493 AL606490.9-201ENST00000603331 271 ntBASIC3.95□□□□□ -1.78
TPM1P09493 AC006077.1-201ENST00000604746 343 ntBASIC3.95□□□□□ -1.78
TPM1P09493 AC107294.3-201ENST00000609211 526 ntBASIC3.95□□□□□ -1.78
TPM1P09493 AC022079.2-201ENST00000619739 566 ntBASIC3.95□□□□□ -1.78
TPM1P09493 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.95□□□□□ -1.78
TPM1P09493 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TPM1P09493 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.95□□□□□ -1.78
TPM1P09493 AP001148.1-201ENST00000624124 2359 ntBASIC3.95□□□□□ -1.78
TPM1P09493 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
TPM1P09493 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TPM1P09493 MTND5P3-201ENST00000438536 1800 ntBASIC3.94□□□□□ -1.78
TPM1P09493 RNA5SP391-201ENST00000363456 119 ntBASIC3.94□□□□□ -1.78
TPM1P09493 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.94□□□□□ -1.78
TPM1P09493 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TPM1P09493 HNRNPDP2-201ENST00000406475 478 ntBASIC3.94□□□□□ -1.78
TPM1P09493 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.94□□□□□ -1.78
TPM1P09493 U3.39-201ENST00000408569 239 ntBASIC3.94□□□□□ -1.78
TPM1P09493 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.94□□□□□ -1.78
TPM1P09493 AC007390.1-201ENST00000415722 356 ntBASIC3.94□□□□□ -1.78
TPM1P09493 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.94□□□□□ -1.78
TPM1P09493 BRWD1P3-201ENST00000428816 390 ntBASIC3.94□□□□□ -1.78
TPM1P09493 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.94□□□□□ -1.78
TPM1P09493 B3GNT2P1-201ENST00000434960 952 ntBASIC3.94□□□□□ -1.78
TPM1P09493 Z99127.2-201ENST00000441426 334 ntBASIC3.94□□□□□ -1.78
TPM1P09493 RPS20P21-201ENST00000466859 343 ntBASIC3.94□□□□□ -1.78
TPM1P09493 AC006463.2-201ENST00000473326 348 ntBASIC3.94□□□□□ -1.78
TPM1P09493 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.94□□□□□ -1.78
TPM1P09493 RN7SL323P-201ENST00000494712 295 ntBASIC3.94□□□□□ -1.78
TPM1P09493 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.94□□□□□ -1.78
TPM1P09493 AC021146.5-201ENST00000503544 545 ntBASIC3.94□□□□□ -1.78
TPM1P09493 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.94□□□□□ -1.78
TPM1P09493 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.94□□□□□ -1.78
TPM1P09493 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.94□□□□□ -1.78
TPM1P09493 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.94□□□□□ -1.78
TPM1P09493 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.94□□□□□ -1.78
TPM1P09493 AC005344.1-201ENST00000613391 459 ntBASIC3.94□□□□□ -1.78
TPM1P09493 XIST_intron.1-201ENST00000619444 68 ntBASIC3.94□□□□□ -1.78
TPM1P09493 AC110801.1-201ENST00000623590 212 ntBASIC3.94□□□□□ -1.78
TPM1P09493 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
TPM1P09493 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TPM1P09493 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TPM1P09493 AL592494.2-201ENST00000425455 1548 ntBASIC3.94□□□□□ -1.78
TPM1P09493 AP004289.2-201ENST00000444413 1457 ntBASIC3.93□□□□□ -1.78
TPM1P09493 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.93□□□□□ -1.78
TPM1P09493 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.93□□□□□ -1.78
TPM1P09493 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TPM1P09493 RNA5SP189-201ENST00000364920 115 ntBASIC3.93□□□□□ -1.78
TPM1P09493 RNA5SP107-201ENST00000411358 122 ntBASIC3.93□□□□□ -1.78
TPM1P09493 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.93□□□□□ -1.78
TPM1P09493 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.93□□□□□ -1.78
TPM1P09493 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.93□□□□□ -1.78
TPM1P09493 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.93□□□□□ -1.78
TPM1P09493 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.93□□□□□ -1.78
TPM1P09493 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TPM1P09493 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.93□□□□□ -1.78
TPM1P09493 CYCSP43-201ENST00000438233 310 ntBASIC3.93□□□□□ -1.78
TPM1P09493 NPM1P49-201ENST00000448027 714 ntBASIC3.93□□□□□ -1.78
TPM1P09493 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TPM1P09493 RPL37P3-201ENST00000456825 293 ntBASIC3.93□□□□□ -1.78
TPM1P09493 RPS4XP2-201ENST00000458402 793 ntBASIC3.93□□□□□ -1.78
TPM1P09493 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.93□□□□□ -1.78
TPM1P09493 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.93□□□□□ -1.78
TPM1P09493 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC3.93□□□□□ -1.78
TPM1P09493 AC034205.1-201ENST00000520621 638 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms