Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.98□□□□□ -1.77
COL1A1P02452 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL1A1P02452 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
COL1A1P02452 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL1A1P02452 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL1A1P02452 RNU6-301P-201ENST00000384277 107 ntBASIC3.98□□□□□ -1.77
COL1A1P02452 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
COL1A1P02452 AC093719.1-202ENST00000392735 373 ntBASIC3.98□□□□□ -1.77
COL1A1P02452 COTL1P1-201ENST00000422309 375 ntBASIC3.98□□□□□ -1.77
COL1A1P02452 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.98□□□□□ -1.77
COL1A1P02452 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.98□□□□□ -1.77
COL1A1P02452 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.98□□□□□ -1.77
COL1A1P02452 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.98□□□□□ -1.77
COL1A1P02452 MIR4672-201ENST00000583126 81 ntBASIC3.98□□□□□ -1.77
COL1A1P02452 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.98□□□□□ -1.77
COL1A1P02452 MIR6715A-201ENST00000615929 79 ntBASIC3.98□□□□□ -1.77
COL1A1P02452 AL713922.2-201ENST00000619384 716 ntBASIC3.98□□□□□ -1.77
COL1A1P02452 SNORD39.4-201ENST00000620099 78 ntBASIC3.98□□□□□ -1.77
COL1A1P02452 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL1A1P02452 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.97□□□□□ -1.77
COL1A1P02452 ZNF807-201ENST00000328088 1707 ntBASIC3.97□□□□□ -1.77
COL1A1P02452 OR4G1P-202ENST00000641173 1788 ntBASIC3.97□□□□□ -1.77
COL1A1P02452 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
COL1A1P02452 AC092435.3-201ENST00000565538 3654 ntBASIC3.97□□□□□ -1.77
COL1A1P02452 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.97□□□□□ -1.77
COL1A1P02452 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.97□□□□□ -1.77
COL1A1P02452 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
COL1A1P02452 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.97□□□□□ -1.77
COL1A1P02452 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
COL1A1P02452 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.97□□□□□ -1.77
COL1A1P02452 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
COL1A1P02452 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.97□□□□□ -1.77
COL1A1P02452 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.97□□□□□ -1.77
COL1A1P02452 RPL23AP69-201ENST00000431134 458 ntBASIC3.97□□□□□ -1.77
COL1A1P02452 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.97□□□□□ -1.77
COL1A1P02452 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.97□□□□□ -1.77
COL1A1P02452 AC008264.1-201ENST00000447612 367 ntBASIC3.97□□□□□ -1.77
COL1A1P02452 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.97□□□□□ -1.77
COL1A1P02452 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.97□□□□□ -1.77
COL1A1P02452 MIR2114-201ENST00000516645 80 ntBASIC3.97□□□□□ -1.77
COL1A1P02452 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.97□□□□□ -1.77
COL1A1P02452 AC113192.3-201ENST00000529152 742 ntBASIC3.97□□□□□ -1.77
COL1A1P02452 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.97□□□□□ -1.77
COL1A1P02452 AC034105.3-201ENST00000565294 442 ntBASIC3.97□□□□□ -1.77
COL1A1P02452 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.97□□□□□ -1.77
COL1A1P02452 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.97□□□□□ -1.77
COL1A1P02452 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.97□□□□□ -1.77
COL1A1P02452 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
COL1A1P02452 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.96□□□□□ -1.78
COL1A1P02452 MAPK10-373ENST00000641983 6772 ntBASIC3.96□□□□□ -1.78
COL1A1P02452 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
COL1A1P02452 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
COL1A1P02452 MIR422A-201ENST00000362286 90 ntBASIC3.96□□□□□ -1.78
COL1A1P02452 SNORA80A-201ENST00000363922 136 ntBASIC3.96□□□□□ -1.78
COL1A1P02452 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL1A1P02452 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.96□□□□□ -1.78
COL1A1P02452 SNORA44-201ENST00000384584 132 ntBASIC3.96□□□□□ -1.78
COL1A1P02452 AC126124.2-201ENST00000413542 321 ntBASIC3.96□□□□□ -1.78
COL1A1P02452 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.96□□□□□ -1.78
COL1A1P02452 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.96□□□□□ -1.78
COL1A1P02452 AL158071.1-201ENST00000430315 461 ntBASIC3.96□□□□□ -1.78
COL1A1P02452 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.96□□□□□ -1.78
COL1A1P02452 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.96□□□□□ -1.78
COL1A1P02452 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
COL1A1P02452 AC233982.1-201ENST00000451247 436 ntBASIC3.96□□□□□ -1.78
COL1A1P02452 RN7SL863P-201ENST00000462370 296 ntBASIC3.96□□□□□ -1.78
COL1A1P02452 AC037198.2-201ENST00000478845 733 ntBASIC3.96□□□□□ -1.78
COL1A1P02452 AC021205.2-201ENST00000480069 347 ntBASIC3.96□□□□□ -1.78
COL1A1P02452 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.96□□□□□ -1.78
COL1A1P02452 SCARNA20.6-201ENST00000517251 106 ntBASIC3.96□□□□□ -1.78
COL1A1P02452 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.96□□□□□ -1.78
COL1A1P02452 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC3.96□□□□□ -1.78
COL1A1P02452 AP000859.1-201ENST00000525536 307 ntBASIC3.96□□□□□ -1.78
COL1A1P02452 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.96□□□□□ -1.78
COL1A1P02452 HIGD1AP1-201ENST00000550979 275 ntBASIC3.96□□□□□ -1.78
COL1A1P02452 AC104984.5-201ENST00000586878 94 ntBASIC3.96□□□□□ -1.78
COL1A1P02452 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.96□□□□□ -1.78
COL1A1P02452 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.96□□□□□ -1.78
COL1A1P02452 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.96□□□□□ -1.78
COL1A1P02452 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
COL1A1P02452 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
COL1A1P02452 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.96□□□□□ -1.78
COL1A1P02452 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
COL1A1P02452 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.96□□□□□ -1.78
COL1A1P02452 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL1A1P02452 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
COL1A1P02452 AL138885.1-201ENST00000405921 675 ntBASIC3.95□□□□□ -1.78
COL1A1P02452 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.95□□□□□ -1.78
COL1A1P02452 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.95□□□□□ -1.78
COL1A1P02452 AC009263.1-201ENST00000441193 1239 ntBASIC3.95□□□□□ -1.78
COL1A1P02452 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
COL1A1P02452 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.95□□□□□ -1.78
COL1A1P02452 MIR2276-201ENST00000516886 89 ntBASIC3.95□□□□□ -1.78
COL1A1P02452 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.95□□□□□ -1.78
COL1A1P02452 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.95□□□□□ -1.78
COL1A1P02452 KCTD9P6-201ENST00000522306 950 ntBASIC3.95□□□□□ -1.78
COL1A1P02452 RNU6-84P-201ENST00000607737 102 ntBASIC3.95□□□□□ -1.78
COL1A1P02452 AL359757.2-201ENST00000624309 274 ntBASIC3.95□□□□□ -1.78
COL1A1P02452 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
COL1A1P02452 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms