Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL442163.2-201ENST00000553912 710 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 TVP23BP1-201ENST00000557500 617 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 MIR4715-201ENST00000584117 79 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 KLKP1-201ENST00000595979 403 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AC068790.7-201ENST00000602347 528 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AC098483.2-201ENST00000603158 454 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AC104785.1-201ENST00000603220 588 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AC010680.4-201ENST00000605334 543 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AL023583.1-201ENST00000607518 1143 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 RNU6-156P-201ENST00000621869 107 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AC092628.2-201ENST00000622492 339 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 C2orf27A-204ENST00000623058 969 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 AC097372.4-201ENST00000625025 466 ntBASIC2.9□□□□□ -1.95
HLA-DQA1P01909 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC2.9□□□□□ -1.95
HLA-DQA1P01909 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AL139811.1-201ENST00000424779 2299 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AC016716.1-201ENST00000265882 708 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 RNA5-8SP7-201ENST00000363443 155 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 RPL23AP59-201ENST00000399415 461 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AL136116.1-201ENST00000403591 381 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 HMGB3P19-201ENST00000403971 560 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 RNA5SP36-201ENST00000410197 133 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 RNU2-21P-201ENST00000410368 188 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 RN7SKP235-201ENST00000410662 305 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AC011933.1-201ENST00000413334 321 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AIMP1P1-201ENST00000418670 937 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AL606495.1-201ENST00000422100 813 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 ARF4P2-201ENST00000430209 526 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 ATP6V0E1P2-201ENST00000441771 245 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AC004865.1-201ENST00000442276 1003 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AC116533.1-201ENST00000459748 321 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 RN7SL459P-201ENST00000481078 302 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 RPL23AP44-201ENST00000482216 473 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AC126121.1-201ENST00000482313 553 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AF213884.1-201ENST00000488102 463 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 OR5AP1P-201ENST00000529730 940 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 ATP5F1P7-201ENST00000567330 760 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AC115286.1-201ENST00000604298 434 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AC006213.5-201ENST00000619673 288 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 MIR7703-201ENST00000620784 77 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 AC132825.7-201ENST00000638744 335 ntBASIC2.89□□□□□ -1.95
HLA-DQA1P01909 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
HLA-DQA1P01909 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AC058791.1-201ENST00000608412 3198 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AL512646.1-201ENST00000269395 1077 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 RNU1-75P-201ENST00000347264 129 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 OR52E6-202ENST00000379946 954 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 MFSD13B-201ENST00000420133 1290 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AL049610.1-201ENST00000423374 372 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 HIGD1AP12-201ENST00000427832 281 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AC068287.1-201ENST00000430283 295 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AL158071.1-201ENST00000430315 461 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 HMGB1P45-201ENST00000435986 653 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 CBX1P1-201ENST00000440184 427 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 HMGB1P48-201ENST00000446155 598 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 AL162151.2-201ENST00000448875 158 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 TPT1P13-201ENST00000449760 499 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC2.88□□□□□ -1.95
HLA-DQA1P01909 MRPS31P2-201ENST00000451581 518 ntBASIC2.88□□□□□ -1.95
HLA-DQA1P01909 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms