Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 AP000553.6-201ENST00000641242 118 ntBASIC3.71□□□□□ -1.82
TRBC1P01850 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TRBC1P01850 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRBC1P01850 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRBC1P01850 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRBC1P01850 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TRBC1P01850 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRBC1P01850 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRBC1P01850 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRBC1P01850 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.7□□□□□ -1.82
TRBC1P01850 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRBC1P01850 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRBC1P01850 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
TRBC1P01850 RNA5SP124-201ENST00000362739 110 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 RNA5SP322-201ENST00000363617 119 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 RNU6-152P-201ENST00000384037 107 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 SNORD3H-201ENST00000384486 214 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 HMGN2P8-201ENST00000391458 268 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 HMGB1P10-201ENST00000395823 563 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 HSPE1P8-201ENST00000406997 288 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.7□□□□□ -1.82
TRBC1P01850 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.7□□□□□ -1.82
TRBC1P01850 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.7□□□□□ -1.82
TRBC1P01850 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.7□□□□□ -1.82
TRBC1P01850 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.7□□□□□ -1.82
TRBC1P01850 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.7□□□□□ -1.82
TRBC1P01850 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.7□□□□□ -1.82
TRBC1P01850 AL606490.8-201ENST00000441624 319 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRBC1P01850 HMGN2P21-201ENST00000447764 270 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.7□□□□□ -1.82
TRBC1P01850 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.7□□□□□ -1.82
TRBC1P01850 AC023632.4-201ENST00000517783 191 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 NARSP2-201ENST00000518524 679 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.7□□□□□ -1.82
TRBC1P01850 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.7□□□□□ -1.82
TRBC1P01850 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.7□□□□□ -1.82
TRBC1P01850 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.7□□□□□ -1.82
TRBC1P01850 POLR2KP1-201ENST00000553226 168 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 AL109741.3-201ENST00000561748 592 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.7□□□□□ -1.82
TRBC1P01850 MIMT1-201ENST00000597105 1050 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRBC1P01850 AC020914.4-201ENST00000597690 277 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRBC1P01850 AC005972.3-201ENST00000606304 481 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.7□□□□□ -1.82
TRBC1P01850 AC084036.1-201ENST00000609190 508 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRBC1P01850 AC039056.2-201ENST00000622261 511 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 AC119674.1-220ENST00000641502 1048 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 AC083899.2-201ENST00000423285 1376 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRBC1P01850 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.7□□□□□ -1.82
TRBC1P01850 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRBC1P01850 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.7□□□□□ -1.82
TRBC1P01850 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TRBC1P01850 AL161912.2-201ENST00000565707 3007 ntBASIC3.7□□□□□ -1.82
TRBC1P01850 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRBC1P01850 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.7□□□□□ -1.82
TRBC1P01850 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TRBC1P01850 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.69□□□□□ -1.82
TRBC1P01850 AP001486.2-201ENST00000561652 5113 ntBASIC3.69□□□□□ -1.82
TRBC1P01850 LINC00561-201ENST00000565815 2738 ntBASIC3.69□□□□□ -1.82
TRBC1P01850 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRBC1P01850 GABPAP-201ENST00000419271 1356 ntBASIC3.69□□□□□ -1.82
TRBC1P01850 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
TRBC1P01850 ATP5F1P4-201ENST00000397288 746 ntBASIC3.69□□□□□ -1.82
TRBC1P01850 DNAJC19P6-201ENST00000401853 280 ntBASIC3.69□□□□□ -1.82
TRBC1P01850 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
TRBC1P01850 HMGB3P20-201ENST00000417997 600 ntBASIC3.69□□□□□ -1.82
TRBC1P01850 RPL21P109-201ENST00000422213 475 ntBASIC3.69□□□□□ -1.82
TRBC1P01850 IFNNP1-201ENST00000429219 553 ntBASIC3.69□□□□□ -1.82
TRBC1P01850 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.69□□□□□ -1.82
TRBC1P01850 AL645931.1-201ENST00000439737 410 ntBASIC3.69□□□□□ -1.82
TRBC1P01850 AL133547.1-201ENST00000448546 220 ntBASIC3.69□□□□□ -1.82
TRBC1P01850 AC099563.1-201ENST00000456086 418 ntBASIC3.69□□□□□ -1.82
TRBC1P01850 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TRBC1P01850 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.69□□□□□ -1.82
TRBC1P01850 HMGB1P3-201ENST00000502802 616 ntBASIC3.69□□□□□ -1.82
TRBC1P01850 HMGN1P11-201ENST00000508668 303 ntBASIC3.69□□□□□ -1.82
TRBC1P01850 SAP18P1-201ENST00000512058 390 ntBASIC3.69□□□□□ -1.82
TRBC1P01850 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.69□□□□□ -1.82
TRBC1P01850 AC104997.1-201ENST00000519761 717 ntBASIC3.69□□□□□ -1.82
TRBC1P01850 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.69□□□□□ -1.82
TRBC1P01850 AC008676.3-201ENST00000521237 435 ntBASIC3.69□□□□□ -1.82
TRBC1P01850 MED28P5-201ENST00000528254 438 ntBASIC3.69□□□□□ -1.82
TRBC1P01850 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.69□□□□□ -1.82
TRBC1P01850 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.69□□□□□ -1.82
TRBC1P01850 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.69□□□□□ -1.82
TRBC1P01850 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.69□□□□□ -1.82
TRBC1P01850 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.69□□□□□ -1.82
TRBC1P01850 AC018754.1-201ENST00000607486 925 ntBASIC3.69□□□□□ -1.82
TRBC1P01850 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.69□□□□□ -1.82
TRBC1P01850 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.69□□□□□ -1.82
TRBC1P01850 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.69□□□□□ -1.82
TRBC1P01850 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRBC1P01850 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.69□□□□□ -1.82
TRBC1P01850 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
TRBC1P01850 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms