Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.15□□□□□ -1.27
RNF40O75150 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF40O75150 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF40O75150 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF40O75150 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
RNF40O75150 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF40O75150 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF40O75150 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC7.14□□□□□ -1.27
RNF40O75150 STAG3L4-201ENST00000352103 530 ntBASIC7.14□□□□□ -1.27
RNF40O75150 RN7SKP250-201ENST00000363924 321 ntBASIC7.14□□□□□ -1.27
RNF40O75150 RNA5SP240-201ENST00000365355 128 ntBASIC7.14□□□□□ -1.27
RNF40O75150 RNY3P13-201ENST00000365542 102 ntBASIC7.14□□□□□ -1.27
RNF40O75150 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF40O75150 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RNF40O75150 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
RNF40O75150 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF40O75150 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
RNF40O75150 AL356421.1-201ENST00000403255 413 ntBASIC7.14□□□□□ -1.27
RNF40O75150 RNA5SP251-201ENST00000410614 137 ntBASIC7.14□□□□□ -1.27
RNF40O75150 CDY19P-201ENST00000411668 1613 ntBASIC7.14□□□□□ -1.27
RNF40O75150 GJA6P-201ENST00000415117 1042 ntBASIC7.14□□□□□ -1.27
RNF40O75150 E2F6P2-201ENST00000420708 748 ntBASIC7.14□□□□□ -1.27
RNF40O75150 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC7.14□□□□□ -1.27
RNF40O75150 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF40O75150 AC236972.1-201ENST00000433225 199 ntBASIC7.14□□□□□ -1.27
RNF40O75150 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.14□□□□□ -1.27
RNF40O75150 FANCD2P2-201ENST00000437591 1400 ntBASIC7.14□□□□□ -1.27
RNF40O75150 CDY18P-201ENST00000438294 1609 ntBASIC7.14□□□□□ -1.27
RNF40O75150 AC011816.1-201ENST00000441346 546 ntBASIC7.14□□□□□ -1.27
RNF40O75150 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.14□□□□□ -1.27
RNF40O75150 RPL21P133-201ENST00000443666 476 ntBASIC7.14□□□□□ -1.27
RNF40O75150 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7.14□□□□□ -1.27
RNF40O75150 AL031584.1-201ENST00000447169 754 ntBASIC7.14□□□□□ -1.27
RNF40O75150 AL354714.5-201ENST00000450131 590 ntBASIC7.14□□□□□ -1.27
RNF40O75150 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RNF40O75150 AC013470.1-201ENST00000453438 462 ntBASIC7.14□□□□□ -1.27
RNF40O75150 RPS26P11-201ENST00000463445 348 ntBASIC7.14□□□□□ -1.27
RNF40O75150 RN7SL390P-201ENST00000470634 284 ntBASIC7.14□□□□□ -1.27
RNF40O75150 RPS26P6-201ENST00000475156 348 ntBASIC7.14□□□□□ -1.27
RNF40O75150 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC7.14□□□□□ -1.27
RNF40O75150 AC009901.1-201ENST00000506703 541 ntBASIC7.14□□□□□ -1.27
RNF40O75150 MTCO3P44-201ENST00000510977 541 ntBASIC7.14□□□□□ -1.27
RNF40O75150 RNU6-1212P-201ENST00000517023 104 ntBASIC7.14□□□□□ -1.27
RNF40O75150 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC7.14□□□□□ -1.27
RNF40O75150 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
RNF40O75150 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.14□□□□□ -1.27
RNF40O75150 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.14□□□□□ -1.27
RNF40O75150 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RNF40O75150 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC7.14□□□□□ -1.27
RNF40O75150 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.14□□□□□ -1.27
RNF40O75150 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF40O75150 AC017100.2-201ENST00000584628 355 ntBASIC7.14□□□□□ -1.27
RNF40O75150 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
RNF40O75150 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC7.14□□□□□ -1.27
RNF40O75150 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC7.14□□□□□ -1.27
RNF40O75150 AC133644.2-201ENST00000608142 540 ntBASIC7.14□□□□□ -1.27
RNF40O75150 SDR42E1P2-201ENST00000614861 481 ntBASIC7.14□□□□□ -1.27
RNF40O75150 SDR42E1P4-201ENST00000620894 481 ntBASIC7.14□□□□□ -1.27
RNF40O75150 AL033543.1-201ENST00000623440 13454 ntBASIC7.14□□□□□ -1.27
RNF40O75150 LDHA-225ENST00000625635 141 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF40O75150 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF40O75150 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF40O75150 AC011471.4-201ENST00000638271 216 ntBASIC7.14□□□□□ -1.27
RNF40O75150 SAMMSON-213ENST00000641336 1521 ntBASIC7.14□□□□□ -1.27
RNF40O75150 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF40O75150 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
RNF40O75150 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC7.14□□□□□ -1.27
RNF40O75150 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.14□□□□□ -1.27
RNF40O75150 DOCK11P1-201ENST00000553480 5932 ntBASIC7.14□□□□□ -1.27
RNF40O75150 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
RNF40O75150 AC093278.2-201ENST00000564956 2485 ntBASIC7.13□□□□□ -1.27
RNF40O75150 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF40O75150 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF40O75150 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF40O75150 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF40O75150 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF40O75150 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
RNF40O75150 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF40O75150 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF40O75150 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF40O75150 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
RNF40O75150 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF40O75150 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF40O75150 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF40O75150 RNU1-5P-201ENST00000362684 144 ntBASIC7.13□□□□□ -1.27
RNF40O75150 RNA5SP172-201ENST00000365061 118 ntBASIC7.13□□□□□ -1.27
RNF40O75150 Y_RNA.424-201ENST00000384063 103 ntBASIC7.13□□□□□ -1.27
RNF40O75150 Y_RNA.464-201ENST00000384282 110 ntBASIC7.13□□□□□ -1.27
RNF40O75150 SNORA70.9-201ENST00000384370 135 ntBASIC7.13□□□□□ -1.27
RNF40O75150 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
RNF40O75150 AP003170.5-201ENST00000397185 335 ntBASIC7.13□□□□□ -1.27
RNF40O75150 RN7SKP188-201ENST00000410789 317 ntBASIC7.13□□□□□ -1.27
RNF40O75150 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF40O75150 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF40O75150 AC114495.1-201ENST00000441274 436 ntBASIC7.13□□□□□ -1.27
RNF40O75150 AL645936.1-201ENST00000441979 518 ntBASIC7.13□□□□□ -1.27
RNF40O75150 AL035090.1-201ENST00000454835 332 ntBASIC7.13□□□□□ -1.27
RNF40O75150 CREM-226ENST00000469949 721 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF40O75150 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF40O75150 CEACAMP10-202ENST00000495431 496 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms