Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.7□□□□□ -1.82
HCN1O60741 AC110792.2-201ENST00000510278 224 ntBASIC3.7□□□□□ -1.82
HCN1O60741 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.7□□□□□ -1.82
HCN1O60741 NDUFB4P9-201ENST00000511646 388 ntBASIC3.7□□□□□ -1.82
HCN1O60741 FTH1P21-201ENST00000512179 511 ntBASIC3.7□□□□□ -1.82
HCN1O60741 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.7□□□□□ -1.82
HCN1O60741 IGKV2D-23-201ENST00000518179 286 ntBASIC3.7□□□□□ -1.82
HCN1O60741 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HCN1O60741 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HCN1O60741 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.7□□□□□ -1.82
HCN1O60741 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.7□□□□□ -1.82
HCN1O60741 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
HCN1O60741 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.7□□□□□ -1.82
HCN1O60741 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.7□□□□□ -1.82
HCN1O60741 AC079148.1-201ENST00000565944 819 ntBASIC3.7□□□□□ -1.82
HCN1O60741 MIR5684-201ENST00000585074 65 ntBASIC3.7□□□□□ -1.82
HCN1O60741 PCNAP1-202ENST00000595299 752 ntBASIC3.7□□□□□ -1.82
HCN1O60741 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.7□□□□□ -1.82
HCN1O60741 AC069304.3-201ENST00000603938 1084 ntBASIC3.7□□□□□ -1.82
HCN1O60741 MIR6875-201ENST00000617506 72 ntBASIC3.7□□□□□ -1.82
HCN1O60741 AC083865.1-201ENST00000636634 831 ntBASIC3.7□□□□□ -1.82
HCN1O60741 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
HCN1O60741 NMD3P1-201ENST00000439704 1488 ntBASIC3.7□□□□□ -1.82
HCN1O60741 AC066616.2-201ENST00000559334 1481 ntBASIC3.7□□□□□ -1.82
HCN1O60741 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.7□□□□□ -1.82
HCN1O60741 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
HCN1O60741 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
HCN1O60741 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.7□□□□□ -1.82
HCN1O60741 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
HCN1O60741 MTND4P31-201ENST00000425607 1343 ntBASIC3.7□□□□□ -1.82
HCN1O60741 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HCN1O60741 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
HCN1O60741 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
HCN1O60741 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HCN1O60741 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HCN1O60741 RNU1-18P-201ENST00000363062 164 ntBASIC3.69□□□□□ -1.82
HCN1O60741 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
HCN1O60741 HMGN2P8-201ENST00000391458 268 ntBASIC3.69□□□□□ -1.82
HCN1O60741 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.69□□□□□ -1.82
HCN1O60741 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HCN1O60741 ATF1P1-201ENST00000406040 927 ntBASIC3.69□□□□□ -1.82
HCN1O60741 PTGES3P2-201ENST00000407942 482 ntBASIC3.69□□□□□ -1.82
HCN1O60741 MIR1303-201ENST00000408625 86 ntBASIC3.69□□□□□ -1.82
HCN1O60741 RNU4-27P-201ENST00000410889 139 ntBASIC3.69□□□□□ -1.82
HCN1O60741 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.69□□□□□ -1.82
HCN1O60741 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.69□□□□□ -1.82
HCN1O60741 PTP4A1P5-201ENST00000420305 455 ntBASIC3.69□□□□□ -1.82
HCN1O60741 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.69□□□□□ -1.82
HCN1O60741 AC008065.1-201ENST00000428525 348 ntBASIC3.69□□□□□ -1.82
HCN1O60741 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.69□□□□□ -1.82
HCN1O60741 AC009263.1-201ENST00000441193 1239 ntBASIC3.69□□□□□ -1.82
HCN1O60741 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.69□□□□□ -1.82
HCN1O60741 CDC27P1-201ENST00000445384 715 ntBASIC3.69□□□□□ -1.82
HCN1O60741 ANP32BP2-201ENST00000454525 545 ntBASIC3.69□□□□□ -1.82
HCN1O60741 HMGN2P7-201ENST00000456186 273 ntBASIC3.69□□□□□ -1.82
HCN1O60741 VN1R105P-201ENST00000486595 910 ntBASIC3.69□□□□□ -1.82
HCN1O60741 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.69□□□□□ -1.82
HCN1O60741 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.69□□□□□ -1.82
HCN1O60741 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.69□□□□□ -1.82
HCN1O60741 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.69□□□□□ -1.82
HCN1O60741 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.69□□□□□ -1.82
HCN1O60741 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.69□□□□□ -1.82
HCN1O60741 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.69□□□□□ -1.82
HCN1O60741 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.69□□□□□ -1.82
HCN1O60741 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.69□□□□□ -1.82
HCN1O60741 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.69□□□□□ -1.82
HCN1O60741 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.69□□□□□ -1.82
HCN1O60741 AC006270.2-201ENST00000578523 652 ntBASIC3.69□□□□□ -1.82
HCN1O60741 AC012254.4-201ENST00000588843 273 ntBASIC3.69□□□□□ -1.82
HCN1O60741 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.69□□□□□ -1.82
HCN1O60741 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.69□□□□□ -1.82
HCN1O60741 AL606490.9-201ENST00000603331 271 ntBASIC3.69□□□□□ -1.82
HCN1O60741 AL034351.1-201ENST00000605288 668 ntBASIC3.69□□□□□ -1.82
HCN1O60741 AL451086.1-201ENST00000605596 223 ntBASIC3.69□□□□□ -1.82
HCN1O60741 RNA5SP108-201ENST00000605921 117 ntBASIC3.69□□□□□ -1.82
HCN1O60741 AC097460.3-201ENST00000623099 442 ntBASIC3.69□□□□□ -1.82
HCN1O60741 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.69□□□□□ -1.82
HCN1O60741 CDRT1-208ENST00000630868 794 ntBASIC3.69□□□□□ -1.82
HCN1O60741 ATE1-AS1-202ENST00000636460 506 ntBASIC3.69□□□□□ -1.82
HCN1O60741 U6.107-201ENST00000637108 79 ntBASIC3.69□□□□□ -1.82
HCN1O60741 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HCN1O60741 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.69□□□□□ -1.82
HCN1O60741 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.69□□□□□ -1.82
HCN1O60741 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.69□□□□□ -1.82
HCN1O60741 IPO8P1-201ENST00000455509 3109 ntBASIC3.68□□□□□ -1.82
HCN1O60741 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
HCN1O60741 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
HCN1O60741 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HCN1O60741 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.68□□□□□ -1.82
HCN1O60741 AL512283.1-201ENST00000606756 1384 ntBASIC3.68□□□□□ -1.82
HCN1O60741 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.68□□□□□ -1.82
HCN1O60741 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.68□□□□□ -1.82
HCN1O60741 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.68□□□□□ -1.82
HCN1O60741 AC025750.1-201ENST00000399891 379 ntBASIC3.68□□□□□ -1.82
HCN1O60741 MTATP6P31-201ENST00000406985 692 ntBASIC3.68□□□□□ -1.82
HCN1O60741 RPL36AP36-201ENST00000418616 301 ntBASIC3.68□□□□□ -1.82
HCN1O60741 OR5BE1P-201ENST00000425977 939 ntBASIC3.68□□□□□ -1.82
HCN1O60741 RPL7P2-201ENST00000427639 268 ntBASIC3.68□□□□□ -1.82
HCN1O60741 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.68□□□□□ -1.82
HCN1O60741 AC023347.2-201ENST00000433994 462 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms