Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4□□□□□ -1.77
PRKNO60260 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4□□□□□ -1.77
PRKNO60260 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4□□□□□ -1.77
PRKNO60260 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4□□□□□ -1.77
PRKNO60260 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4□□□□□ -1.77
PRKNO60260 AC116447.1-201ENST00000613153 453 ntBASIC4□□□□□ -1.77
PRKNO60260 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4□□□□□ -1.77
PRKNO60260 AC006338.2-201ENST00000616864 791 ntBASIC4□□□□□ -1.77
PRKNO60260 AC140113.4-201ENST00000622087 222 ntBASIC4□□□□□ -1.77
PRKNO60260 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4□□□□□ -1.77
PRKNO60260 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
PRKNO60260 AC119744.1-201ENST00000454746 1715 ntBASIC4□□□□□ -1.77
PRKNO60260 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4□□□□□ -1.77
PRKNO60260 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PRKNO60260 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4□□□□□ -1.77
PRKNO60260 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4□□□□□ -1.77
PRKNO60260 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4□□□□□ -1.77
PRKNO60260 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC3.99□□□□□ -1.77
PRKNO60260 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRKNO60260 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRKNO60260 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRKNO60260 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRKNO60260 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.99□□□□□ -1.77
PRKNO60260 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC3.99□□□□□ -1.77
PRKNO60260 MFSD8-242ENST00000641690 4199 ntBASIC3.99□□□□□ -1.77
PRKNO60260 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRKNO60260 AC000123.3-201ENST00000624029 4975 ntBASIC3.99□□□□□ -1.77
PRKNO60260 HMGB1P5-201ENST00000255320 642 ntBASIC3.99□□□□□ -1.77
PRKNO60260 RNU1-20P-201ENST00000363314 162 ntBASIC3.99□□□□□ -1.77
PRKNO60260 RNU6-560P-201ENST00000364007 108 ntBASIC3.99□□□□□ -1.77
PRKNO60260 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
PRKNO60260 SNORD65.1-201ENST00000390889 71 ntBASIC3.99□□□□□ -1.77
PRKNO60260 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.99□□□□□ -1.77
PRKNO60260 AL078604.1-201ENST00000404609 466 ntBASIC3.99□□□□□ -1.77
PRKNO60260 RN7SKP235-201ENST00000410662 305 ntBASIC3.99□□□□□ -1.77
PRKNO60260 RNU2-6P-201ENST00000411404 190 ntBASIC3.99□□□□□ -1.77
PRKNO60260 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.99□□□□□ -1.77
PRKNO60260 OR51A3P-201ENST00000413596 924 ntBASIC3.99□□□□□ -1.77
PRKNO60260 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.99□□□□□ -1.77
PRKNO60260 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC3.99□□□□□ -1.77
PRKNO60260 AC011233.1-201ENST00000422812 283 ntBASIC3.99□□□□□ -1.77
PRKNO60260 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.99□□□□□ -1.77
PRKNO60260 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.99□□□□□ -1.77
PRKNO60260 DPRXP1-201ENST00000426312 460 ntBASIC3.99□□□□□ -1.77
PRKNO60260 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.99□□□□□ -1.77
PRKNO60260 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC3.99□□□□□ -1.77
PRKNO60260 COX6CP18-201ENST00000448769 222 ntBASIC3.99□□□□□ -1.77
PRKNO60260 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.99□□□□□ -1.77
PRKNO60260 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PRKNO60260 UQCRHP4-201ENST00000471686 272 ntBASIC3.99□□□□□ -1.77
PRKNO60260 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.99□□□□□ -1.77
PRKNO60260 RPL35P6-201ENST00000490024 372 ntBASIC3.99□□□□□ -1.77
PRKNO60260 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.99□□□□□ -1.77
PRKNO60260 AC108475.1-201ENST00000507880 950 ntBASIC3.99□□□□□ -1.77
PRKNO60260 AC116353.3-201ENST00000511215 249 ntBASIC3.99□□□□□ -1.77
PRKNO60260 AC109471.1-201ENST00000511631 612 ntBASIC3.99□□□□□ -1.77
PRKNO60260 AC010285.3-201ENST00000511668 676 ntBASIC3.99□□□□□ -1.77
PRKNO60260 HMGB1P19-201ENST00000517578 577 ntBASIC3.99□□□□□ -1.77
PRKNO60260 IGHVIII-2-1-201ENST00000518843 291 ntBASIC3.99□□□□□ -1.77
PRKNO60260 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.99□□□□□ -1.77
PRKNO60260 AC087373.1-201ENST00000524920 491 ntBASIC3.99□□□□□ -1.77
PRKNO60260 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.99□□□□□ -1.77
PRKNO60260 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.99□□□□□ -1.77
PRKNO60260 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.99□□□□□ -1.77
PRKNO60260 AL352979.3-201ENST00000553515 247 ntBASIC3.99□□□□□ -1.77
PRKNO60260 AC008015.1-201ENST00000555505 465 ntBASIC3.99□□□□□ -1.77
PRKNO60260 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.99□□□□□ -1.77
PRKNO60260 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.99□□□□□ -1.77
PRKNO60260 AC087465.1-201ENST00000560574 245 ntBASIC3.99□□□□□ -1.77
PRKNO60260 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.99□□□□□ -1.77
PRKNO60260 AC115085.1-201ENST00000588924 229 ntBASIC3.99□□□□□ -1.77
PRKNO60260 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.99□□□□□ -1.77
PRKNO60260 IPO5P1-202ENST00000600039 287 ntBASIC3.99□□□□□ -1.77
PRKNO60260 Z99497.2-201ENST00000603634 310 ntBASIC3.99□□□□□ -1.77
PRKNO60260 AC069545.1-201ENST00000605671 358 ntBASIC3.99□□□□□ -1.77
PRKNO60260 AC018638.7-201ENST00000605836 1114 ntBASIC3.99□□□□□ -1.77
PRKNO60260 AL450489.1-201ENST00000612071 468 ntBASIC3.99□□□□□ -1.77
PRKNO60260 MIR6716-201ENST00000613413 80 ntBASIC3.99□□□□□ -1.77
PRKNO60260 AC004943.3-201ENST00000624116 600 ntBASIC3.99□□□□□ -1.77
PRKNO60260 MIR3653-201ENST00000625572 110 ntBASIC3.99□□□□□ -1.77
PRKNO60260 MIR3974-201ENST00000637126 96 ntBASIC3.99□□□□□ -1.77
PRKNO60260 AC008013.2-202ENST00000637965 364 ntBASIC3.99□□□□□ -1.77
PRKNO60260 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.99□□□□□ -1.77
PRKNO60260 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PRKNO60260 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
PRKNO60260 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRKNO60260 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PRKNO60260 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRKNO60260 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
PRKNO60260 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
PRKNO60260 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
PRKNO60260 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
PRKNO60260 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.98□□□□□ -1.77
PRKNO60260 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
PRKNO60260 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PRKNO60260 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PRKNO60260 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
PRKNO60260 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
PRKNO60260 RNU6-304P-201ENST00000364855 107 ntBASIC3.98□□□□□ -1.77
PRKNO60260 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms