Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
RIPK2O43353 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
RIPK2O43353 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
RIPK2O43353 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
RIPK2O43353 MIR383-201ENST00000362257 73 ntBASIC3.9□□□□□ -1.79
RIPK2O43353 RNU6-1339P-201ENST00000363574 91 ntBASIC3.9□□□□□ -1.79
RIPK2O43353 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
RIPK2O43353 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RIPK2O43353 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RIPK2O43353 RN7SKP278-201ENST00000410504 342 ntBASIC3.9□□□□□ -1.79
RIPK2O43353 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.9□□□□□ -1.79
RIPK2O43353 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.9□□□□□ -1.79
RIPK2O43353 PNRC2P1-201ENST00000423940 420 ntBASIC3.9□□□□□ -1.79
RIPK2O43353 TBCAP1-201ENST00000436520 327 ntBASIC3.9□□□□□ -1.79
RIPK2O43353 FABP5P3-201ENST00000437960 408 ntBASIC3.9□□□□□ -1.79
RIPK2O43353 HMGB1P12-201ENST00000438594 598 ntBASIC3.9□□□□□ -1.79
RIPK2O43353 UBE2V1P5-201ENST00000440070 405 ntBASIC3.9□□□□□ -1.79
RIPK2O43353 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RIPK2O43353 AL513321.1-201ENST00000441175 761 ntBASIC3.9□□□□□ -1.79
RIPK2O43353 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.9□□□□□ -1.79
RIPK2O43353 snoU13.1-201ENST00000459157 104 ntBASIC3.9□□□□□ -1.79
RIPK2O43353 RPL21P104-201ENST00000464143 478 ntBASIC3.9□□□□□ -1.79
RIPK2O43353 AC013356.1-201ENST00000489027 564 ntBASIC3.9□□□□□ -1.79
RIPK2O43353 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.9□□□□□ -1.79
RIPK2O43353 RNA5SP208-201ENST00000516156 78 ntBASIC3.9□□□□□ -1.79
RIPK2O43353 RNU6-362P-201ENST00000516736 90 ntBASIC3.9□□□□□ -1.79
RIPK2O43353 RNA5SP179-201ENST00000517284 121 ntBASIC3.9□□□□□ -1.79
RIPK2O43353 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.79
RIPK2O43353 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC3.9□□□□□ -1.79
RIPK2O43353 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.9□□□□□ -1.79
RIPK2O43353 MIR3690-201ENST00000580266 75 ntBASIC3.9□□□□□ -1.79
RIPK2O43353 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.9□□□□□ -1.79
RIPK2O43353 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.9□□□□□ -1.79
RIPK2O43353 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.9□□□□□ -1.79
RIPK2O43353 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
RIPK2O43353 MIR1264-201ENST00000616374 69 ntBASIC3.9□□□□□ -1.79
RIPK2O43353 AC010608.2-201ENST00000624830 470 ntBASIC3.9□□□□□ -1.79
RIPK2O43353 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.9□□□□□ -1.79
RIPK2O43353 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.9□□□□□ -1.79
RIPK2O43353 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.9□□□□□ -1.79
RIPK2O43353 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.9□□□□□ -1.79
RIPK2O43353 AP002001.2-201ENST00000529025 1469 ntBASIC3.9□□□□□ -1.79
RIPK2O43353 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RIPK2O43353 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RIPK2O43353 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.9□□□□□ -1.79
RIPK2O43353 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.9□□□□□ -1.79
RIPK2O43353 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.89□□□□□ -1.79
RIPK2O43353 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.89□□□□□ -1.79
RIPK2O43353 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RIPK2O43353 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
RIPK2O43353 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 AC016716.1-201ENST00000265882 708 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RIPK2O43353 RNA5SP443-201ENST00000363083 132 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 RNU6-283P-201ENST00000364788 107 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 RNU6-328P-201ENST00000390887 106 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.89□□□□□ -1.79
RIPK2O43353 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.89□□□□□ -1.79
RIPK2O43353 RPS27AP7-201ENST00000422792 455 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 AC006466.1-201ENST00000438721 289 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 AL138878.2-201ENST00000440581 1241 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 MTND2P6-201ENST00000455337 1030 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 NF1P3-201ENST00000457709 450 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 RPL35AP28-201ENST00000459730 331 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 AC011276.1-201ENST00000469688 323 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 RN7SL303P-201ENST00000469773 251 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 RPS4XP13-201ENST00000483219 789 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.89□□□□□ -1.79
RIPK2O43353 HMGB1P38-201ENST00000490557 577 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 RAC1P2-201ENST00000511164 579 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RIPK2O43353 RNU6-488P-201ENST00000515918 99 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.89□□□□□ -1.79
RIPK2O43353 MTCYBP41-201ENST00000528913 1123 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.89□□□□□ -1.79
RIPK2O43353 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.89□□□□□ -1.79
RIPK2O43353 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.89□□□□□ -1.79
RIPK2O43353 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.89□□□□□ -1.79
RIPK2O43353 MIR4330-201ENST00000579077 105 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 MIR4738-201ENST00000579134 87 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.89□□□□□ -1.79
RIPK2O43353 AC017100.2-201ENST00000584628 355 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 AC211433.2-201ENST00000608433 387 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 AC005156.1-201ENST00000613371 573 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 MIR8059-201ENST00000620427 81 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 AP003400.6-201ENST00000624698 740 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 MIR3653-201ENST00000625572 110 ntBASIC3.89□□□□□ -1.79
RIPK2O43353 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
RIPK2O43353 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
RIPK2O43353 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
RIPK2O43353 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
RIPK2O43353 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RIPK2O43353 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
RIPK2O43353 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RIPK2O43353 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
RIPK2O43353 RNA5SP509-201ENST00000364577 119 ntBASIC3.88□□□□□ -1.79
RIPK2O43353 PTMAP5-201ENST00000393073 333 ntBASIC3.88□□□□□ -1.79
RIPK2O43353 AL121972.1-201ENST00000402023 252 ntBASIC3.88□□□□□ -1.79
RIPK2O43353 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms