Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 MIR4425-201ENST00000580572 84 ntBASIC5.88□□□□□ -1.47
CUX2O14529 AC006272.2-201ENST00000594725 163 ntBASIC5.88□□□□□ -1.47
CUX2O14529 AC015849.6-201ENST00000605454 474 ntBASIC5.88□□□□□ -1.47
CUX2O14529 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.88□□□□□ -1.47
CUX2O14529 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CUX2O14529 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CUX2O14529 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
CUX2O14529 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.88□□□□□ -1.47
CUX2O14529 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CUX2O14529 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CUX2O14529 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CUX2O14529 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CUX2O14529 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.87□□□□□ -1.47
CUX2O14529 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.87□□□□□ -1.47
CUX2O14529 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CUX2O14529 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CUX2O14529 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
CUX2O14529 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CUX2O14529 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CUX2O14529 RANP7-201ENST00000418085 644 ntBASIC5.87□□□□□ -1.47
CUX2O14529 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.87□□□□□ -1.47
CUX2O14529 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.87□□□□□ -1.47
CUX2O14529 SUMO2P20-201ENST00000520803 283 ntBASIC5.87□□□□□ -1.47
CUX2O14529 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC5.87□□□□□ -1.47
CUX2O14529 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.87□□□□□ -1.47
CUX2O14529 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CUX2O14529 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CUX2O14529 AC006504.1-201ENST00000562493 3666 ntBASIC5.87□□□□□ -1.47
CUX2O14529 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.87□□□□□ -1.47
CUX2O14529 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CUX2O14529 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC5.86□□□□□ -1.47
CUX2O14529 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CUX2O14529 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CUX2O14529 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CUX2O14529 AL513477.1-202ENST00000417061 214 ntBASIC5.86□□□□□ -1.47
CUX2O14529 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.86□□□□□ -1.47
CUX2O14529 NANOGP6-201ENST00000429190 847 ntBASIC5.86□□□□□ -1.47
CUX2O14529 YWHAQP9-201ENST00000445891 512 ntBASIC5.86□□□□□ -1.47
CUX2O14529 AC098824.1-201ENST00000453565 980 ntBASIC5.86□□□□□ -1.47
CUX2O14529 snoU13.23-201ENST00000458863 104 ntBASIC5.86□□□□□ -1.47
CUX2O14529 AC012123.2-201ENST00000485809 248 ntBASIC5.86□□□□□ -1.47
CUX2O14529 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.86□□□□□ -1.47
CUX2O14529 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.86□□□□□ -1.47
CUX2O14529 HNRNPKP5-201ENST00000515300 253 ntBASIC5.86□□□□□ -1.47
CUX2O14529 OOSP1P2-201ENST00000579644 351 ntBASIC5.86□□□□□ -1.47
CUX2O14529 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.86□□□□□ -1.47
CUX2O14529 AP003072.5-201ENST00000623872 773 ntBASIC5.86□□□□□ -1.47
CUX2O14529 KPNA2P2-201ENST00000419546 1489 ntBASIC5.86□□□□□ -1.47
CUX2O14529 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CUX2O14529 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CUX2O14529 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC5.86□□□□□ -1.47
CUX2O14529 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC5.86□□□□□ -1.47
CUX2O14529 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CUX2O14529 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
CUX2O14529 XGY1-201ENST00000381172 446 ntBASIC5.85□□□□□ -1.47
CUX2O14529 RNU6-167P-201ENST00000384292 106 ntBASIC5.85□□□□□ -1.47
CUX2O14529 JKAMPP1-201ENST00000413804 919 ntBASIC5.85□□□□□ -1.47
CUX2O14529 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.85□□□□□ -1.47
CUX2O14529 AC099563.1-201ENST00000456086 418 ntBASIC5.85□□□□□ -1.47
CUX2O14529 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
CUX2O14529 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC5.85□□□□□ -1.47
CUX2O14529 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.85□□□□□ -1.47
CUX2O14529 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CUX2O14529 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.85□□□□□ -1.47
CUX2O14529 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC5.85□□□□□ -1.47
CUX2O14529 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.85□□□□□ -1.47
CUX2O14529 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CUX2O14529 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CUX2O14529 SAGE2P-201ENST00000420011 2126 ntBASIC5.85□□□□□ -1.47
CUX2O14529 AL645937.1-201ENST00000641739 1652 ntBASIC5.85□□□□□ -1.47
CUX2O14529 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.85□□□□□ -1.47
CUX2O14529 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CUX2O14529 FRG1CP-201ENST00000358464 769 ntBASIC5.84□□□□□ -1.47
CUX2O14529 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.84□□□□□ -1.47
CUX2O14529 RAP1BP1-201ENST00000412709 553 ntBASIC5.84□□□□□ -1.47
CUX2O14529 AC108734.1-201ENST00000439549 399 ntBASIC5.84□□□□□ -1.47
CUX2O14529 RN7SL863P-201ENST00000462370 296 ntBASIC5.84□□□□□ -1.47
CUX2O14529 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC5.84□□□□□ -1.47
CUX2O14529 RN7SKP244-201ENST00000516513 307 ntBASIC5.84□□□□□ -1.47
CUX2O14529 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.84□□□□□ -1.47
CUX2O14529 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC5.84□□□□□ -1.47
CUX2O14529 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC5.84□□□□□ -1.47
CUX2O14529 AL137246.1-201ENST00000607072 977 ntBASIC5.84□□□□□ -1.47
CUX2O14529 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CUX2O14529 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.84□□□□□ -1.47
CUX2O14529 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CUX2O14529 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.84□□□□□ -1.48
CUX2O14529 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC5.84□□□□□ -1.48
CUX2O14529 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC5.84□□□□□ -1.48
CUX2O14529 AL078595.2-201ENST00000605309 1780 ntBASIC5.84□□□□□ -1.48
CUX2O14529 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
CUX2O14529 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
CUX2O14529 AC007899.1-201ENST00000412776 775 ntBASIC5.83□□□□□ -1.48
CUX2O14529 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC5.83□□□□□ -1.48
CUX2O14529 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.83□□□□□ -1.48
CUX2O14529 EEF1B2P7-201ENST00000451177 676 ntBASIC5.83□□□□□ -1.48
CUX2O14529 RPL7P38-201ENST00000488396 739 ntBASIC5.83□□□□□ -1.48
CUX2O14529 AC112184.1-201ENST00000505179 312 ntBASIC5.83□□□□□ -1.48
CUX2O14529 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.83□□□□□ -1.48
CUX2O14529 RN7SKP31-201ENST00000516354 278 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms