Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC009237.13-201ENST00000603193 276 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 AL139286.2-201ENST00000606838 396 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 AL357080.1-201ENST00000617394 239 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 AL590240.3-201ENST00000621416 943 ntBASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
PCDHGA3Q9Y5H0 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
PCDHGA3Q9Y5H0 ASNSP1-201ENST00000518311 1939 ntBASIC5.09□□□□□ -1.6
PCDHGA3Q9Y5H0 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
PCDHGA3Q9Y5H0 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 RN7SKP103-201ENST00000363848 320 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 ARF4P3-201ENST00000397387 509 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AL390316.1-201ENST00000406279 553 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 OR4K12P-201ENST00000406538 961 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 RN7SKP266-201ENST00000410232 287 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 RN7SKP126-201ENST00000411143 300 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 RPS15AP40-201ENST00000419621 391 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AC006366.1-201ENST00000422002 759 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 MTCO2P5-201ENST00000422621 426 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 RPL34P6-201ENST00000432390 345 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AL138878.2-201ENST00000440581 1241 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AC073465.2-201ENST00000440938 498 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 MTCO1P19-201ENST00000443487 500 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 GEMIN8P3-201ENST00000445417 720 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AL589765.3-201ENST00000446084 462 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 VN1R32P-201ENST00000452234 905 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 SSXP1-201ENST00000453640 473 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 USP9YP34-201ENST00000453983 808 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 DNAJC19P1-201ENST00000455312 319 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 CFTRP1-201ENST00000456646 183 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AC091564.1-201ENST00000464563 479 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 TMEM251P1-201ENST00000503717 318 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AC004069.2-201ENST00000505438 1114 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 CBX3P3-201ENST00000508108 532 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AC016559.2-201ENST00000510759 359 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AC024589.1-201ENST00000512207 263 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AP002963.1-201ENST00000530590 184 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AC040958.1-201ENST00000561102 201 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AL133457.1-201ENST00000564251 987 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AC141257.3-201ENST00000572906 215 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 MAGOH2P-202ENST00000584384 429 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 MIR3611-201ENST00000584484 83 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AC022146.1-201ENST00000595307 847 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AC005084.1-201ENST00000605160 304 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AL513477.2-201ENST00000607858 568 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AL353600.1-201ENST00000608148 251 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 MIR6820-201ENST00000611508 62 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AC013562.2-201ENST00000611632 603 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AC025588.4-201ENST00000615802 908 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AC012414.7-202ENST00000622705 1090 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 Z95327.2-201ENST00000414579 1873 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 AC000123.3-201ENST00000624029 4975 ntBASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA3Q9Y5H0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA3Q9Y5H0 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms