Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AC023347.2-201ENST00000433994 462 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AC092641.1-201ENST00000440229 772 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AC011753.3-201ENST00000443436 406 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 BMI1P1-201ENST00000445879 941 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 KNOP1P3-201ENST00000446933 426 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AC239809.1-201ENST00000450470 217 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 OR52J1P-201ENST00000450596 932 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 SNRPGP9-201ENST00000456025 225 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 MTCO3P2-201ENST00000457365 171 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AC097493.1-201ENST00000463958 372 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 PPIAP21-201ENST00000464473 501 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AC114981.1-201ENST00000503897 678 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AC004069.2-201ENST00000505438 1114 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 RN7SKP260-201ENST00000516907 149 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AC008033.2-201ENST00000542626 177 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AC074029.1-201ENST00000552531 1044 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 EDDM3DP-201ENST00000554692 434 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AGGF1P4-201ENST00000568249 801 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AC090181.2-201ENST00000602975 672 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AC006363.1-201ENST00000603806 463 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AC025594.3-201ENST00000613068 790 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AP000346.3-201ENST00000622821 210 ntBASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
PCDHB1Q9Y5F3 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 RNU6-501P-201ENST00000364072 100 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 RNU6-441P-201ENST00000384545 106 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 RNY3P10-201ENST00000384764 102 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 MIR649-201ENST00000384843 97 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 SNRPEP2-201ENST00000397592 279 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 RN7SKP16-201ENST00000410180 299 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 RN7SKP114-201ENST00000410327 279 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 CHEK2P3-201ENST00000416118 248 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AC104333.2-201ENST00000422630 192 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AL512649.1-201ENST00000428997 581 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AL831737.1-201ENST00000441288 271 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AL354714.3-201ENST00000447284 493 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 ST13P20-201ENST00000447996 1065 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 TRGVB-201ENST00000453257 471 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 CFTRP1-201ENST00000456646 183 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AL672167.3-201ENST00000465951 960 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AC092757.1-201ENST00000467293 467 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AC073073.1-201ENST00000493920 463 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 RPL30P11-201ENST00000495304 339 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 CBX3P3-201ENST00000508108 532 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 BTF3P13-201ENST00000513224 490 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 RFPL4AP5-201ENST00000514977 504 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AC105031.1-201ENST00000518550 476 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 NPM1P6-201ENST00000521088 871 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AC021006.3-201ENST00000530771 192 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 LSM6P2-201ENST00000552208 177 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 PSMB7P1-201ENST00000556349 514 ntBASIC5.03□□□□□ -1.6
PCDHB1Q9Y5F3 AC009117.1-201ENST00000563948 554 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms