Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RFC5P1-201ENST00000454419 874 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 RPL5P30-201ENST00000465511 891 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 RPL30P6-201ENST00000475925 342 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 AC026979.1-201ENST00000492525 396 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 AL035404.1-201ENST00000497982 568 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 AC091868.1-201ENST00000508746 304 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 MTCYBP16-201ENST00000509187 1129 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 MTCYBP37-201ENST00000510642 1133 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 AC093840.1-201ENST00000511599 336 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 AC010587.2-201ENST00000511727 448 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 HNRNPKP5-201ENST00000515300 253 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 AC087808.1-201ENST00000520501 361 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 AC005832.3-201ENST00000537929 631 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 RFPL1S-203ENST00000539579 330 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 SULT1C2P2-201ENST00000562517 294 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 AC103987.3-201ENST00000582071 292 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 AC119751.7-201ENST00000600494 245 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 AL353600.1-201ENST00000608148 251 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 AL139418.1-201ENST00000613613 177 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 AL022401.1-201ENST00000619498 108 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 AF246928.1-201ENST00000623768 87 ntBASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SSX2IPQ9Y2D8 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AC025263.3-201ENST00000622965 1396 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 ZNF137P-201ENST00000456718 1920 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AC126755.2-208ENST00000327792 462 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AC138969.1-213ENST00000331436 462 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 TMSB4XP8-201ENST00000402089 135 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AL355379.1-201ENST00000405542 640 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 TMSB4XP6-201ENST00000415187 135 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AC140479.3-201ENST00000418944 1126 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 UQCRBP1-201ENST00000421129 336 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 TMSB4XP1-201ENST00000424567 135 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 RPS24P8-201ENST00000431490 402 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 USP9YP28-201ENST00000435142 589 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AC073587.1-201ENST00000447093 876 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AC098799.3-201ENST00000506095 438 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 MTCO3P7-201ENST00000510008 774 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AC015795.1-201ENST00000513669 327 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 RNU6-709P-201ENST00000517257 104 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 HMGB1P23-201ENST00000518743 568 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 HMGB3P26-201ENST00000560051 582 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 VN1R90P-201ENST00000595717 726 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 RPL12P25-202ENST00000598100 674 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AL031985.2-201ENST00000600955 480 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AC023813.4-201ENST00000607580 580 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AC055764.2-201ENST00000610089 670 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AC013562.2-201ENST00000611632 603 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AC004223.4-201ENST00000612426 332 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AC091965.5-201ENST00000624785 342 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 BMS1P21-201ENST00000634565 365 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 RNF6P1-201ENST00000444889 1784 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 Z99496.1-201ENST00000469424 1477 ntBASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSX2IPQ9Y2D8 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 AC139713.2-214ENST00000642059 1811 ntBASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSX2IPQ9Y2D8 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms