Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 RN7SKP82-201ENST00000516786 223 ntBASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 DUXAP2-201ENST00000519198 589 ntBASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 AP000619.3-201ENST00000535634 1127 ntBASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 AC084033.1-201ENST00000550830 633 ntBASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CTNNA3Q9UI47 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 RNF19BPX-201ENST00000426224 625 ntBASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 MTND2P8-201ENST00000450555 1025 ntBASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 RNU6-1004P-201ENST00000516584 111 ntBASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 SCARNA13-201ENST00000516672 275 ntBASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 AC006960.3-201ENST00000561845 705 ntBASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 MIR548Y-201ENST00000582739 110 ntBASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 MIR7973-1-201ENST00000614683 76 ntBASIC4.5□□□□□ -1.69
CTNNA3Q9UI47 AC024560.2-201ENST00000507981 1497 ntBASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 LINC00561-201ENST00000565815 2738 ntBASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 AC007685.1-201ENST00000329806 452 ntBASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 RNA5SP424-201ENST00000390988 115 ntBASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 AC105402.1-201ENST00000413336 545 ntBASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 AC091390.3-201ENST00000426478 338 ntBASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 Z85994.2-201ENST00000434327 452 ntBASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 FTH1P24-201ENST00000503502 462 ntBASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 PCNAP1-201ENST00000505363 709 ntBASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 RN7SKP209-201ENST00000516888 304 ntBASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 AC092747.2-201ENST00000545069 983 ntBASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 AC115085.1-201ENST00000588924 229 ntBASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 AL160281.1-201ENST00000605307 311 ntBASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 BRDTP1-201ENST00000605735 677 ntBASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 AL391261.4-201ENST00000616012 481 ntBASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 AC079684.1-201ENST00000621405 437 ntBASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 AC004943.3-201ENST00000624116 600 ntBASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 AC091905.1-201ENST00000624400 311 ntBASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CTNNA3Q9UI47 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 OR4A15-201ENST00000314706 1035 ntBASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 RNU6-185P-201ENST00000384421 107 ntBASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 SNORA11.2-201ENST00000408318 127 ntBASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 RN7SKP156-201ENST00000410308 342 ntBASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 SNORA57.3-201ENST00000411095 141 ntBASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 AC087385.1-201ENST00000475062 312 ntBASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 AC005798.1-201ENST00000513715 387 ntBASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 AC093853.1-201ENST00000515689 483 ntBASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 RNA5SP208-201ENST00000516156 78 ntBASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 AC087499.8-201ENST00000578406 226 ntBASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 MIR5187-201ENST00000583479 76 ntBASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 AP003117.2-201ENST00000606010 545 ntBASIC4.48□□□□□ -1.69
CTNNA3Q9UI47 AC020978.9-201ENST00000624380 1141 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms