Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CTSFQ9UBX1 MTND5P3-201ENST00000438536 1800 ntBASIC3.65□□□□□ -1.82
CTSFQ9UBX1 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
CTSFQ9UBX1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.65□□□□□ -1.82
CTSFQ9UBX1 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
CTSFQ9UBX1 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
CTSFQ9UBX1 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CTSFQ9UBX1 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
CTSFQ9UBX1 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CTSFQ9UBX1 U1.1-201ENST00000384101 164 ntBASIC3.65□□□□□ -1.83
CTSFQ9UBX1 MIR23B-201ENST00000384832 97 ntBASIC3.65□□□□□ -1.83
CTSFQ9UBX1 MIR7-1-201ENST00000384871 110 ntBASIC3.65□□□□□ -1.83
CTSFQ9UBX1 HSPE1P26-201ENST00000405341 275 ntBASIC3.65□□□□□ -1.83
CTSFQ9UBX1 SNORA57.3-201ENST00000411095 141 ntBASIC3.65□□□□□ -1.83
CTSFQ9UBX1 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.65□□□□□ -1.83
CTSFQ9UBX1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.65□□□□□ -1.83
CTSFQ9UBX1 Z74696.2-201ENST00000436514 498 ntBASIC3.65□□□□□ -1.83
CTSFQ9UBX1 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.65□□□□□ -1.83
CTSFQ9UBX1 NOTCH2P1-201ENST00000443481 624 ntBASIC3.65□□□□□ -1.83
CTSFQ9UBX1 CFTRP1-201ENST00000456646 183 ntBASIC3.65□□□□□ -1.83
CTSFQ9UBX1 AC078918.1-201ENST00000498515 228 ntBASIC3.65□□□□□ -1.83
CTSFQ9UBX1 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.65□□□□□ -1.83
CTSFQ9UBX1 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CTSFQ9UBX1 OR4A12P-201ENST00000530847 918 ntBASIC3.65□□□□□ -1.83
CTSFQ9UBX1 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.65□□□□□ -1.83
CTSFQ9UBX1 OR6C73P-201ENST00000546432 358 ntBASIC3.65□□□□□ -1.83
CTSFQ9UBX1 AC245128.3-201ENST00000594721 748 ntBASIC3.65□□□□□ -1.83
CTSFQ9UBX1 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.65□□□□□ -1.83
CTSFQ9UBX1 AC112230.1-201ENST00000604342 547 ntBASIC3.65□□□□□ -1.83
CTSFQ9UBX1 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CTSFQ9UBX1 BX322635.1-201ENST00000605804 496 ntBASIC3.65□□□□□ -1.83
CTSFQ9UBX1 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CTSFQ9UBX1 AC005344.1-201ENST00000613391 459 ntBASIC3.65□□□□□ -1.83
CTSFQ9UBX1 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CTSFQ9UBX1 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CTSFQ9UBX1 CR392039.5-201ENST00000623201 510 ntBASIC3.65□□□□□ -1.83
CTSFQ9UBX1 AC048347.1-201ENST00000624621 427 ntBASIC3.65□□□□□ -1.83
CTSFQ9UBX1 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC3.65□□□□□ -1.83
CTSFQ9UBX1 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.65□□□□□ -1.83
CTSFQ9UBX1 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.65□□□□□ -1.83
CTSFQ9UBX1 AP004289.2-201ENST00000444413 1457 ntBASIC3.65□□□□□ -1.83
CTSFQ9UBX1 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.65□□□□□ -1.83
CTSFQ9UBX1 MTND4P31-201ENST00000425607 1343 ntBASIC3.65□□□□□ -1.83
CTSFQ9UBX1 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
CTSFQ9UBX1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CTSFQ9UBX1 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 U8.11-201ENST00000384699 133 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 U8.12-201ENST00000384701 133 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 OR4F13P-201ENST00000428478 931 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 MRPS33P4-201ENST00000434892 317 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 CYCSP43-201ENST00000438233 310 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 AL133547.1-201ENST00000448546 220 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 AL136097.1-201ENST00000456945 913 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 U8.18-201ENST00000459285 133 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 RPL37P6-202ENST00000464216 403 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 RPS20P21-201ENST00000466859 343 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 ACTR3P3-201ENST00000480448 893 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 AP002812.1-201ENST00000495378 474 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 AC109458.1-201ENST00000508858 316 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 SNORA48.9-201ENST00000516419 162 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 RNU4-60P-201ENST00000517239 135 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 NARSP2-201ENST00000518524 679 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 IGKV2-23-201ENST00000518729 323 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 AC022695.1-201ENST00000522089 237 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 MIR92B-201ENST00000607575 96 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 AC112200.1-201ENST00000625015 234 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 AC119674.1-220ENST00000641502 1048 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 AP001148.1-201ENST00000624124 2359 ntBASIC3.64□□□□□ -1.83
CTSFQ9UBX1 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CTSFQ9UBX1 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.63□□□□□ -1.83
CTSFQ9UBX1 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CTSFQ9UBX1 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CTSFQ9UBX1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.63□□□□□ -1.83
CTSFQ9UBX1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CTSFQ9UBX1 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
CTSFQ9UBX1 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms