Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MTND4P16-201ENST00000466108 1367 ntBASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.75□□□□□ -1.49
PDLIM7Q9NR12 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 IGKV7-3-201ENST00000357453 298 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 Y_RNA.9-201ENST00000362354 101 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 RNU6-1011P-201ENST00000384668 107 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 RNU11-201ENST00000387069 134 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 CCNG1P1-201ENST00000406783 885 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 AC069213.2-201ENST00000420238 366 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 AL139413.1-201ENST00000421309 217 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 MTCO3P1-205ENST00000422088 832 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 AL161722.2-201ENST00000434731 981 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 MTND4LP10-201ENST00000435146 291 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 RPL36AP15-201ENST00000444514 266 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 PSPHP1-201ENST00000450062 261 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 GAPDHP14-201ENST00000450472 937 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 PPP1R11P1-201ENST00000486095 376 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 AC069439.1-201ENST00000494739 167 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 AC011352.3-201ENST00000505162 593 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 COX6B1P5-201ENST00000509843 249 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 AC010342.1-201ENST00000514047 877 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 MIR3913-1-201ENST00000577744 102 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 AL360012.1-201ENST00000602813 131 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 MKKS-204ENST00000639674 192 ntBASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.74□□□□□ -1.49
PDLIM7Q9NR12 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 MTND4P12-201ENST00000498999 1377 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 AC008033.1-201ENST00000216407 1162 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 Y_RNA.372-201ENST00000365599 102 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 OR1L6-202ENST00000373684 1044 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 RNA5SP332-201ENST00000391063 115 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 AL590002.1-201ENST00000406554 418 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 FCF1P10-201ENST00000407590 479 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 RN7SKP114-201ENST00000410327 279 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 USP9YP13-201ENST00000417797 480 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 AC048351.1-201ENST00000420064 602 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 RPS27AP6-201ENST00000427962 448 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 OR7E125P-201ENST00000443450 846 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 REG1CP-206ENST00000447469 496 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 RPL7AP52-201ENST00000458096 790 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 RN7SL189P-201ENST00000468631 289 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 LARP1BP2-201ENST00000486594 519 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 AC098799.3-201ENST00000506095 438 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 RNU6-885P-201ENST00000516607 104 ntBASIC5.73□□□□□ -1.49
PDLIM7Q9NR12 RNA5SP135-201ENST00000517019 125 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms