Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC006960.3-201ENST00000561845 705 ntBASIC3.79□□□□□ -1.8
C9orf72Q96LT7 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 BNIP3P33-201ENST00000598912 569 ntBASIC3.79□□□□□ -1.8
C9orf72Q96LT7 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 AC039056.2-201ENST00000622261 511 ntBASIC3.79□□□□□ -1.8
C9orf72Q96LT7 CR392039.4-201ENST00000624968 501 ntBASIC3.79□□□□□ -1.8
C9orf72Q96LT7 AC119674.1-220ENST00000641502 1048 ntBASIC3.79□□□□□ -1.8
C9orf72Q96LT7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 AL353743.4-201ENST00000422653 1547 ntBASIC3.79□□□□□ -1.8
C9orf72Q96LT7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
C9orf72Q96LT7 AL161912.2-201ENST00000565707 3007 ntBASIC3.78□□□□□ -1.8
C9orf72Q96LT7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
C9orf72Q96LT7 OR4A15-201ENST00000314706 1035 ntBASIC3.78□□□□□ -1.8
C9orf72Q96LT7 DHFRP5-201ENST00000406944 564 ntBASIC3.78□□□□□ -1.8
C9orf72Q96LT7 SNORA3.3-201ENST00000408712 125 ntBASIC3.78□□□□□ -1.8
C9orf72Q96LT7 RN7SKP156-201ENST00000410308 342 ntBASIC3.78□□□□□ -1.8
C9orf72Q96LT7 SNORA57.3-201ENST00000411095 141 ntBASIC3.78□□□□□ -1.8
C9orf72Q96LT7 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
C9orf72Q96LT7 TCEA1P2-201ENST00000420496 906 ntBASIC3.78□□□□□ -1.8
C9orf72Q96LT7 AC017083.1-201ENST00000428093 483 ntBASIC3.78□□□□□ -1.8
C9orf72Q96LT7 MTCO1P52-201ENST00000433928 531 ntBASIC3.78□□□□□ -1.8
C9orf72Q96LT7 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.78□□□□□ -1.8
C9orf72Q96LT7 AC245517.2-201ENST00000442890 346 ntBASIC3.78□□□□□ -1.8
C9orf72Q96LT7 AL133547.1-201ENST00000448546 220 ntBASIC3.78□□□□□ -1.8
C9orf72Q96LT7 AC006480.1-201ENST00000449887 378 ntBASIC3.78□□□□□ -1.8
C9orf72Q96LT7 TPMTP4-201ENST00000450749 678 ntBASIC3.78□□□□□ -1.8
C9orf72Q96LT7 RPS20P21-201ENST00000466859 343 ntBASIC3.78□□□□□ -1.8
C9orf72Q96LT7 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.78□□□□□ -1.8
C9orf72Q96LT7 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.78□□□□□ -1.8
C9orf72Q96LT7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.78□□□□□ -1.8
C9orf72Q96LT7 AC106785.3-201ENST00000564064 847 ntBASIC3.78□□□□□ -1.8
C9orf72Q96LT7 AC073111.2-201ENST00000605657 1075 ntBASIC3.78□□□□□ -1.8
C9orf72Q96LT7 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.78□□□□□ -1.8
C9orf72Q96LT7 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.78□□□□□ -1.8
C9orf72Q96LT7 CR392039.5-201ENST00000623201 510 ntBASIC3.78□□□□□ -1.8
C9orf72Q96LT7 AF001550.2-201ENST00000636643 217 ntBASIC3.78□□□□□ -1.8
C9orf72Q96LT7 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
C9orf72Q96LT7 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
C9orf72Q96LT7 RNF6P1-201ENST00000444889 1784 ntBASIC3.78□□□□□ -1.8
C9orf72Q96LT7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
C9orf72Q96LT7 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
C9orf72Q96LT7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.78□□□□□ -1.8
C9orf72Q96LT7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.81
C9orf72Q96LT7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf72Q96LT7 AC138393.1-206ENST00000540997 1886 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf72Q96LT7 RNA5SP424-201ENST00000390988 115 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 AL691447.1-201ENST00000419456 387 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 AL159169.1-201ENST00000421119 127 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 AL355994.1-201ENST00000424379 260 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.77□□□□□ -1.81
C9orf72Q96LT7 RPS24P8-201ENST00000431490 402 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 ARL4AP4-201ENST00000434170 518 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 NOTCH2P1-201ENST00000443481 624 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.77□□□□□ -1.81
C9orf72Q96LT7 CYCSP53-201ENST00000455540 265 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 AC087385.1-201ENST00000475062 312 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.77□□□□□ -1.81
C9orf72Q96LT7 NDUFB4P9-201ENST00000511646 388 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 RNA5SP309-201ENST00000516670 106 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 RNU6-352P-201ENST00000516908 107 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.77□□□□□ -1.81
C9orf72Q96LT7 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.77□□□□□ -1.81
C9orf72Q96LT7 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.77□□□□□ -1.81
C9orf72Q96LT7 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.77□□□□□ -1.81
C9orf72Q96LT7 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.77□□□□□ -1.81
C9orf72Q96LT7 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.77□□□□□ -1.81
C9orf72Q96LT7 AC022387.2-201ENST00000604050 448 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.77□□□□□ -1.81
C9orf72Q96LT7 AC115621.1-201ENST00000604653 858 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 AC010680.4-201ENST00000605334 543 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 BNIP3P7-201ENST00000605641 516 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 MIR7973-1-201ENST00000614683 76 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 U7.8-201ENST00000619968 63 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 AC004943.3-201ENST00000624116 600 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 AC020978.9-201ENST00000624380 1141 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.77□□□□□ -1.81
C9orf72Q96LT7 SAGE2P-201ENST00000420011 2126 ntBASIC3.77□□□□□ -1.81
C9orf72Q96LT7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf72Q96LT7 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf72Q96LT7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
C9orf72Q96LT7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
C9orf72Q96LT7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
C9orf72Q96LT7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
C9orf72Q96LT7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
C9orf72Q96LT7 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.76□□□□□ -1.81
C9orf72Q96LT7 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
C9orf72Q96LT7 MIR124-3-201ENST00000384866 87 ntBASIC3.76□□□□□ -1.81
C9orf72Q96LT7 MIR200C-201ENST00000384980 68 ntBASIC3.76□□□□□ -1.81
C9orf72Q96LT7 ZNF602P-201ENST00000405929 924 ntBASIC3.76□□□□□ -1.81
C9orf72Q96LT7 AC092832.1-201ENST00000422934 400 ntBASIC3.76□□□□□ -1.81
C9orf72Q96LT7 AC074367.1-201ENST00000438685 1125 ntBASIC3.76□□□□□ -1.81
C9orf72Q96LT7 AL645931.1-201ENST00000439737 410 ntBASIC3.76□□□□□ -1.81
C9orf72Q96LT7 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.76□□□□□ -1.81
C9orf72Q96LT7 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.76□□□□□ -1.81
C9orf72Q96LT7 VN1R34P-201ENST00000447387 883 ntBASIC3.76□□□□□ -1.81
C9orf72Q96LT7 MTND2P8-201ENST00000450555 1025 ntBASIC3.76□□□□□ -1.81
C9orf72Q96LT7 AC091564.1-201ENST00000464563 479 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms