Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TMEM54Q969K7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TMEM54Q969K7 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TMEM54Q969K7 RNU6-1005P-201ENST00000384519 107 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 RNU6-796P-201ENST00000391086 107 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 HMGN2P8-201ENST00000391458 268 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 ZNF603P-201ENST00000405613 487 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 MIR1183-201ENST00000408856 89 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 AC004987.3-201ENST00000413879 771 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 AL390879.2-203ENST00000426943 1121 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 MTND4P15-201ENST00000437913 1033 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 RNFT1P2-201ENST00000443064 757 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 AC008565.1-201ENST00000509046 885 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 RNA5SP208-201ENST00000516156 78 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 SCARNA14-201ENST00000516903 136 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 AC022695.1-201ENST00000522089 237 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 AC083923.1-201ENST00000523708 376 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 C1DP5-201ENST00000525775 383 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 AC139103.1-201ENST00000534696 1030 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 AC007424.1-203ENST00000554613 687 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 RN7SL703P-201ENST00000578485 302 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 AC090312.2-201ENST00000582687 378 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 AP003117.2-201ENST00000606010 545 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 SNORA62.6-201ENST00000606322 83 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TMEM54Q969K7 MIR6864-201ENST00000617935 70 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 AL354798.1-201ENST00000622505 329 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 AC024595.1-201ENST00000623088 387 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 AC091905.1-201ENST00000624400 311 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 AC068724.3-201ENST00000625906 87 ntBASIC3.36□□□□□ -1.87
TMEM54Q969K7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TMEM54Q969K7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.36□□□□□ -1.87
TMEM54Q969K7 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TMEM54Q969K7 LINC00561-201ENST00000565815 2738 ntBASIC3.35□□□□□ -1.87
TMEM54Q969K7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.35□□□□□ -1.87
TMEM54Q969K7 AC095050.2-201ENST00000510748 1458 ntBASIC3.35□□□□□ -1.87
TMEM54Q969K7 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
TMEM54Q969K7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
TMEM54Q969K7 FAM91A3P-201ENST00000456826 2544 ntBASIC3.35□□□□□ -1.87
TMEM54Q969K7 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TMEM54Q969K7 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TMEM54Q969K7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
TMEM54Q969K7 RN7SKP227-201ENST00000364445 330 ntBASIC3.35□□□□□ -1.87
TMEM54Q969K7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.35□□□□□ -1.87
TMEM54Q969K7 RNU1-89P-201ENST00000384592 164 ntBASIC3.35□□□□□ -1.87
TMEM54Q969K7 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TMEM54Q969K7 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.35□□□□□ -1.87
TMEM54Q969K7 AC092745.2-202ENST00000411880 369 ntBASIC3.35□□□□□ -1.87
TMEM54Q969K7 AL158825.1-201ENST00000414735 521 ntBASIC3.35□□□□□ -1.87
TMEM54Q969K7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.35□□□□□ -1.87
TMEM54Q969K7 HIGD1AP12-201ENST00000427832 281 ntBASIC3.35□□□□□ -1.87
TMEM54Q969K7 IFNNP1-201ENST00000429219 553 ntBASIC3.35□□□□□ -1.87
TMEM54Q969K7 ETF1P3-201ENST00000430422 1160 ntBASIC3.35□□□□□ -1.87
TMEM54Q969K7 RPS26P40-201ENST00000435209 294 ntBASIC3.35□□□□□ -1.87
TMEM54Q969K7 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.35□□□□□ -1.87
TMEM54Q969K7 HMGB1P48-201ENST00000446155 598 ntBASIC3.35□□□□□ -1.87
TMEM54Q969K7 AC006480.1-201ENST00000449887 378 ntBASIC3.35□□□□□ -1.87
TMEM54Q969K7 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.35□□□□□ -1.87
TMEM54Q969K7 DNAJC19P1-201ENST00000455312 319 ntBASIC3.35□□□□□ -1.87
TMEM54Q969K7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
TMEM54Q969K7 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.35□□□□□ -1.87
TMEM54Q969K7 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.35□□□□□ -1.87
TMEM54Q969K7 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.35□□□□□ -1.87
TMEM54Q969K7 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.35□□□□□ -1.87
TMEM54Q969K7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.35□□□□□ -1.87
TMEM54Q969K7 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.35□□□□□ -1.87
TMEM54Q969K7 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.35□□□□□ -1.87
TMEM54Q969K7 RNU6-1102P-201ENST00000516149 96 ntBASIC3.35□□□□□ -1.87
TMEM54Q969K7 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms