Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AP000943.4-201ENST00000622912 357 ntBASIC4.51□□□□□ -1.69
SNED1Q8TER0 AC068620.4-201ENST00000636730 1182 ntBASIC4.51□□□□□ -1.69
SNED1Q8TER0 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.51□□□□□ -1.69
SNED1Q8TER0 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SNED1Q8TER0 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNED1Q8TER0 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SNED1Q8TER0 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.51□□□□□ -1.69
SNED1Q8TER0 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SNED1Q8TER0 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNED1Q8TER0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNED1Q8TER0 AC005332.5-201ENST00000591222 2919 ntBASIC4.5□□□□□ -1.69
SNED1Q8TER0 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SNED1Q8TER0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNED1Q8TER0 RNU6-564P-201ENST00000410983 104 ntBASIC4.5□□□□□ -1.69
SNED1Q8TER0 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.5□□□□□ -1.69
SNED1Q8TER0 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.5□□□□□ -1.69
SNED1Q8TER0 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.5□□□□□ -1.69
SNED1Q8TER0 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.5□□□□□ -1.69
SNED1Q8TER0 AL645931.1-201ENST00000439737 410 ntBASIC4.5□□□□□ -1.69
SNED1Q8TER0 AC069277.2-201ENST00000454211 432 ntBASIC4.5□□□□□ -1.69
SNED1Q8TER0 AL136126.1-201ENST00000473603 402 ntBASIC4.5□□□□□ -1.69
SNED1Q8TER0 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC4.5□□□□□ -1.69
SNED1Q8TER0 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.5□□□□□ -1.69
SNED1Q8TER0 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SNED1Q8TER0 AC010285.3-201ENST00000511668 676 ntBASIC4.5□□□□□ -1.69
SNED1Q8TER0 MTND2P32-201ENST00000521584 1038 ntBASIC4.5□□□□□ -1.69
SNED1Q8TER0 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SNED1Q8TER0 AC113192.3-201ENST00000529152 742 ntBASIC4.5□□□□□ -1.69
SNED1Q8TER0 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.5□□□□□ -1.69
SNED1Q8TER0 AC012414.2-201ENST00000559474 187 ntBASIC4.5□□□□□ -1.69
SNED1Q8TER0 AL049838.1-201ENST00000563647 981 ntBASIC4.5□□□□□ -1.69
SNED1Q8TER0 AC015911.5-201ENST00000587076 451 ntBASIC4.5□□□□□ -1.69
SNED1Q8TER0 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.5□□□□□ -1.69
SNED1Q8TER0 AC023813.4-201ENST00000607580 580 ntBASIC4.5□□□□□ -1.69
SNED1Q8TER0 ATE1-AS1-202ENST00000636460 506 ntBASIC4.5□□□□□ -1.69
SNED1Q8TER0 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SNED1Q8TER0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNED1Q8TER0 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SNED1Q8TER0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SNED1Q8TER0 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SNED1Q8TER0 AC009229.4-201ENST00000623854 1947 ntBASIC4.5□□□□□ -1.69
SNED1Q8TER0 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.5□□□□□ -1.69
SNED1Q8TER0 AC097504.1-201ENST00000515103 2415 ntBASIC4.5□□□□□ -1.69
SNED1Q8TER0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SNED1Q8TER0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SNED1Q8TER0 AL133383.2-201ENST00000622958 2336 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SNED1Q8TER0 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
SNED1Q8TER0 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
SNED1Q8TER0 AC110792.3-201ENST00000595906 1614 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SNED1Q8TER0 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SNED1Q8TER0 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SNED1Q8TER0 RNU4-35P-201ENST00000362588 141 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 RNA5SP50-201ENST00000363731 107 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SNED1Q8TER0 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.49□□□□□ -1.69
SNED1Q8TER0 Z85994.2-201ENST00000434327 452 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 ELOCP8-201ENST00000439309 332 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 ELOCP15-201ENST00000442090 332 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 RPL7L1P1-201ENST00000448259 785 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC4.49□□□□□ -1.69
SNED1Q8TER0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.49□□□□□ -1.69
SNED1Q8TER0 AC017015.1-201ENST00000477387 286 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 MTND6P6-201ENST00000478031 263 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 AC108941.1-201ENST00000502853 530 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 AC005351.1-201ENST00000511152 786 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.49□□□□□ -1.69
SNED1Q8TER0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.49□□□□□ -1.69
SNED1Q8TER0 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.49□□□□□ -1.69
SNED1Q8TER0 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.49□□□□□ -1.69
SNED1Q8TER0 AL390334.1-201ENST00000556395 450 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.49□□□□□ -1.69
SNED1Q8TER0 AC093510.2-201ENST00000562820 896 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 AC233702.9-201ENST00000581528 203 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 AC005156.1-201ENST00000613371 573 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 AC009464.1-201ENST00000615731 469 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 MIR7112-201ENST00000616126 65 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 AC009032.1-201ENST00000617574 431 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SNED1Q8TER0 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SNED1Q8TER0 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.49□□□□□ -1.69
SNED1Q8TER0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SNED1Q8TER0 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SNED1Q8TER0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SNED1Q8TER0 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SNED1Q8TER0 MTND5P31-201ENST00000419366 1374 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 UBE3AP2-201ENST00000429033 2259 ntBASIC4.49□□□□□ -1.69
SNED1Q8TER0 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SNED1Q8TER0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.48□□□□□ -1.69
SNED1Q8TER0 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.48□□□□□ -1.69
SNED1Q8TER0 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
SNED1Q8TER0 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNED1Q8TER0 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
SNED1Q8TER0 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNED1Q8TER0 RNU6-1000P-201ENST00000391066 106 ntBASIC4.48□□□□□ -1.69
SNED1Q8TER0 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SNED1Q8TER0 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.48□□□□□ -1.69
SNED1Q8TER0 AC106883.1-201ENST00000418805 562 ntBASIC4.48□□□□□ -1.69
SNED1Q8TER0 AC245054.1-201ENST00000420944 258 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms