Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATG4DQ86TL0 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 ASNSP1-204ENST00000641977 1664 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 AC139426.3-201ENST00000605648 2059 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 SELENOWP1-201ENST00000322792 252 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 SNRPEP3-201ENST00000338402 276 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 RN7SKP247-201ENST00000411094 308 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 HMGB3P2-201ENST00000411913 584 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 AL807761.1-201ENST00000417622 171 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 RPS4XP5-201ENST00000419038 768 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 COX6CP17-201ENST00000421389 185 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 AL136380.1-201ENST00000447970 162 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 AC006499.2-201ENST00000513470 337 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 MIR2117-201ENST00000516780 80 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 RN7SKP295-201ENST00000517264 153 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 RANP9-201ENST00000519957 271 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 AC027309.2-201ENST00000520566 192 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 NRBF2P4-201ENST00000520874 850 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 AP002404.1-201ENST00000532005 451 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 AP000889.2-201ENST00000532684 490 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 AC005357.1-201ENST00000588399 301 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 CYP2C61P-201ENST00000604072 290 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 AC245389.1-201ENST00000605141 529 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 AL157817.1-201ENST00000614264 790 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 AC024884.1-201ENST00000620583 399 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 AL136228.1-201ENST00000622221 319 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.37□□□□□ -1.55
ATG4DQ86TL0 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATG4DQ86TL0 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 BRAFP1-201ENST00000445336 2703 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 RNA5SP273-201ENST00000362484 113 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 RNA5SP514-201ENST00000363717 111 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 DEFB109C-201ENST00000382575 264 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 DEFB109B-201ENST00000382656 264 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 RN7SKP266-201ENST00000410232 287 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AC073264.1-201ENST00000411508 416 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 SLC35E1P1-201ENST00000419313 864 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 RPS3P2-201ENST00000421346 701 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AC019097.1-201ENST00000424783 735 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AL590399.2-201ENST00000427536 309 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AL669831.1-202ENST00000428504 417 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 RBMY2QP-201ENST00000429799 1147 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 RPL23AP30-201ENST00000432419 501 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AL356276.2-201ENST00000435919 558 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AL049734.2-201ENST00000441066 616 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AC005077.1-201ENST00000449226 375 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 HMGB3P22-202ENST00000451823 572 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 MTCO3P10-201ENST00000455912 772 ntBASIC5.36□□□□□ -1.55
ATG4DQ86TL0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms