Protein–RNA interactions for Protein: Q6NT76

HMBOX1, Homeobox-containing protein 1, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1Q6NT76 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 HSPE1P23-201ENST00000509838 286 ntBASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 RNU6-709P-201ENST00000517257 104 ntBASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 CYCSP28-201ENST00000534284 321 ntBASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 HIGD1AP17-201ENST00000554576 276 ntBASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 AC079171.1-201ENST00000568788 914 ntBASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 VN1R82P-201ENST00000601481 356 ntBASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 AL390816.3-201ENST00000604527 1066 ntBASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 AL592221.1-201ENST00000605266 382 ntBASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 OR2AS2P-201ENST00000606902 342 ntBASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 AC004223.4-201ENST00000612426 332 ntBASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 AC121761.2-201ENST00000617300 689 ntBASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 AL022401.1-201ENST00000619498 108 ntBASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 AL359757.1-201ENST00000623176 255 ntBASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 AC098679.4-201ENST00000624241 654 ntBASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 AL592182.3-201ENST00000642132 3304 ntBASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 AC092435.4-201ENST00000623012 4159 ntBASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 MAPK10-304ENST00000641341 3984 ntBASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 AL445523.1-201ENST00000451184 1362 ntBASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 MTND4P34-201ENST00000572715 1371 ntBASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 AL445437.1-201ENST00000623157 3087 ntBASIC4.52□□□□□ -1.69
HMBOX1Q6NT76 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AC139713.2-215ENST00000641428 5037 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AC008758.3-201ENST00000507003 1829 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AC109315.1-201ENST00000584143 1347 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 OR10J6P-201ENST00000289731 930 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 Y_RNA.77-201ENST00000362962 107 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 RN7SKP167-201ENST00000411047 285 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 BTF3L4P1-201ENST00000413813 468 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 CEACAMP8-201ENST00000413902 580 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 MRPS36P1-201ENST00000421291 307 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 DPRXP1-201ENST00000426312 460 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 RPP40P1-201ENST00000426762 456 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 USP9YP9-201ENST00000429406 715 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AL354941.1-201ENST00000438600 464 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 ELOCP8-201ENST00000439309 332 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AC093155.1-201ENST00000440164 826 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 ELOCP15-201ENST00000442090 332 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 MTCO2P7-201ENST00000446518 666 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 RPL7P59-201ENST00000447700 943 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AC092324.1-201ENST00000468671 324 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AC097484.1-201ENST00000471148 389 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 RN7SL558P-201ENST00000497468 299 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 PGBD4P4-201ENST00000509673 613 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AC010587.2-201ENST00000511727 448 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 RN7SKP31-201ENST00000516354 278 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 Y_RNA.719-201ENST00000517156 106 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AP003033.1-201ENST00000527244 415 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 TOMM20P2-201ENST00000540082 421 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 UBE2NP1-201ENST00000545592 458 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 HMGB3P26-201ENST00000560051 582 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AP005119.2-201ENST00000579735 1105 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 AC011447.4-201ENST00000587562 111 ntBASIC4.51□□□□□ -1.69
HMBOX1Q6NT76 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms