Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MIR4433B-201ENST00000581329 102 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
PCDH1Q08174 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.83□□□□□ -1.48
PCDH1Q08174 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.83□□□□□ -1.48
PCDH1Q08174 AC106900.2-201ENST00000604994 317 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDH1Q08174 AL359091.2-201ENST00000609303 556 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 uc_338.31-201ENST00000615595 186 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 AC009318.4-201ENST00000620496 486 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDH1Q08174 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDH1Q08174 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDH1Q08174 AC005725.1-201ENST00000577346 2607 ntBASIC5.83□□□□□ -1.48
PCDH1Q08174 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDH1Q08174 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDH1Q08174 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDH1Q08174 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDH1Q08174 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PCDH1Q08174 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDH1Q08174 RBMY1HP-201ENST00000382759 1389 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDH1Q08174 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDH1Q08174 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
PCDH1Q08174 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDH1Q08174 AC232271.1-201ENST00000602455 2715 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDH1Q08174 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDH1Q08174 RNU6-254P-201ENST00000363377 107 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 Y_RNA.144-201ENST00000363521 113 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 SNORD42.2-201ENST00000365570 69 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDH1Q08174 RNU6-43P-201ENST00000384302 107 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 RNU6-606P-201ENST00000384721 111 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDH1Q08174 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDH1Q08174 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDH1Q08174 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDH1Q08174 AP000936.3-201ENST00000438127 255 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 GTF2IP13-201ENST00000438487 386 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 SPRYD7P1-201ENST00000443861 570 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 AL450996.1-201ENST00000445574 1202 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDH1Q08174 AC097463.1-201ENST00000447288 481 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 EEF1B2P3-201ENST00000447718 678 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 AC016027.4-201ENST00000450866 277 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.82□□□□□ -1.48
PCDH1Q08174 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDH1Q08174 TRBV26-201ENST00000456572 344 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 PPP1R2P5-201ENST00000457256 603 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 AC007547.1-201ENST00000462177 490 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 TRBV5-2-201ENST00000489095 273 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDH1Q08174 TOMM22P4-201ENST00000511318 336 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 AP000907.2-201ENST00000530827 353 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 ELOCP31-201ENST00000540463 467 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 AC068831.4-201ENST00000556118 109 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.82□□□□□ -1.48
PCDH1Q08174 MIR4271-201ENST00000582451 67 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.82□□□□□ -1.48
PCDH1Q08174 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDH1Q08174 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDH1Q08174 AC025470.1-201ENST00000510053 2032 ntBASIC5.82□□□□□ -1.48
PCDH1Q08174 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDH1Q08174 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDH1Q08174 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PCDH1Q08174 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDH1Q08174 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PCDH1Q08174 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PCDH1Q08174 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDH1Q08174 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDH1Q08174 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDH1Q08174 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.82□□□□□ -1.48
PCDH1Q08174 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDH1Q08174 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PCDH1Q08174 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDH1Q08174 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDH1Q08174 AP001284.1-201ENST00000528393 2118 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 AC005224.3-201ENST00000584683 2140 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 AC140134.1-201ENST00000511830 3544 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDH1Q08174 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDH1Q08174 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PCDH1Q08174 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
PCDH1Q08174 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDH1Q08174 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDH1Q08174 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
PCDH1Q08174 RNU6-28P-201ENST00000362378 107 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 RNA5SP375-201ENST00000362975 119 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 RNA5SP211-201ENST00000365516 117 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
PCDH1Q08174 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.81□□□□□ -1.48
PCDH1Q08174 RNU6-474P-201ENST00000384243 107 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PCDH1Q08174 AC137499.1-201ENST00000427602 88 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 USP24P1-201ENST00000433802 779 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 AC073410.1-201ENST00000435125 589 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 GAPDHP59-201ENST00000435908 267 ntBASIC5.81□□□□□ -1.48
PCDH1Q08174 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.81□□□□□ -1.48
PCDH1Q08174 Y_RNA.639-201ENST00000458981 102 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms