Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC099676.1-201ENST00000608886 657 ntBASIC4.28□□□□□ -1.72
LTBQ06643 AC234782.5-201ENST00000617723 324 ntBASIC4.28□□□□□ -1.72
LTBQ06643 STMN1P1-201ENST00000617809 440 ntBASIC4.28□□□□□ -1.72
LTBQ06643 AC099842.1-201ENST00000619919 596 ntBASIC4.28□□□□□ -1.72
LTBQ06643 AL607023.1-201ENST00000620045 248 ntBASIC4.28□□□□□ -1.72
LTBQ06643 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.28□□□□□ -1.72
LTBQ06643 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.28□□□□□ -1.72
LTBQ06643 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LTBQ06643 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LTBQ06643 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.28□□□□□ -1.72
LTBQ06643 ZNF833P-201ENST00000424938 1494 ntBASIC4.28□□□□□ -1.72
LTBQ06643 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LTBQ06643 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
LTBQ06643 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.28□□□□□ -1.72
LTBQ06643 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
LTBQ06643 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LTBQ06643 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LTBQ06643 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.28□□□□□ -1.72
LTBQ06643 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
LTBQ06643 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.73
LTBQ06643 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LTBQ06643 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
LTBQ06643 AC025263.3-201ENST00000622965 1396 ntBASIC4.27□□□□□ -1.73
LTBQ06643 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.27□□□□□ -1.73
LTBQ06643 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LTBQ06643 AC010300.1-201ENST00000600671 5134 ntBASIC4.27□□□□□ -1.73
LTBQ06643 AL355852.1-201ENST00000454081 1771 ntBASIC4.27□□□□□ -1.73
LTBQ06643 AC083843.3-201ENST00000623679 2186 ntBASIC4.27□□□□□ -1.73
LTBQ06643 AL122126.1-201ENST00000546905 1318 ntBASIC4.27□□□□□ -1.73
LTBQ06643 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.27□□□□□ -1.73
LTBQ06643 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
LTBQ06643 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.27□□□□□ -1.73
LTBQ06643 RNU1-64P-201ENST00000365443 163 ntBASIC4.27□□□□□ -1.73
LTBQ06643 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
LTBQ06643 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LTBQ06643 MIR134-201ENST00000385258 73 ntBASIC4.27□□□□□ -1.73
LTBQ06643 U3.22-201ENST00000391120 215 ntBASIC4.27□□□□□ -1.73
LTBQ06643 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.27□□□□□ -1.73
LTBQ06643 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LTBQ06643 RNA5SP113-201ENST00000410486 84 ntBASIC4.27□□□□□ -1.73
LTBQ06643 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.27□□□□□ -1.73
LTBQ06643 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.27□□□□□ -1.73
LTBQ06643 FABP7P1-201ENST00000424004 391 ntBASIC4.27□□□□□ -1.73
LTBQ06643 MTCO1P19-201ENST00000443487 500 ntBASIC4.27□□□□□ -1.73
LTBQ06643 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.27□□□□□ -1.73
LTBQ06643 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.27□□□□□ -1.73
LTBQ06643 AC011005.3-201ENST00000491624 395 ntBASIC4.27□□□□□ -1.73
LTBQ06643 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.27□□□□□ -1.73
LTBQ06643 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.27□□□□□ -1.73
LTBQ06643 HMGB3P13-201ENST00000511263 607 ntBASIC4.27□□□□□ -1.73
LTBQ06643 TCP11X3P-202ENST00000514289 1254 ntBASIC4.27□□□□□ -1.73
LTBQ06643 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.27□□□□□ -1.73
LTBQ06643 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.27□□□□□ -1.73
LTBQ06643 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.27□□□□□ -1.73
LTBQ06643 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.27□□□□□ -1.73
LTBQ06643 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.27□□□□□ -1.73
LTBQ06643 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.27□□□□□ -1.73
LTBQ06643 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LTBQ06643 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.27□□□□□ -1.73
LTBQ06643 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
LTBQ06643 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.27□□□□□ -1.73
LTBQ06643 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.27□□□□□ -1.73
LTBQ06643 AC006272.2-201ENST00000594725 163 ntBASIC4.27□□□□□ -1.73
LTBQ06643 WISP1-OT1-201ENST00000602893 642 ntBASIC4.27□□□□□ -1.73
LTBQ06643 AL512782.1-201ENST00000603093 364 ntBASIC4.27□□□□□ -1.73
LTBQ06643 AC093765.1-201ENST00000603758 881 ntBASIC4.27□□□□□ -1.73
LTBQ06643 BNIP3P4-201ENST00000604946 565 ntBASIC4.27□□□□□ -1.73
LTBQ06643 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.27□□□□□ -1.73
LTBQ06643 AL451074.6-201ENST00000608512 729 ntBASIC4.27□□□□□ -1.73
LTBQ06643 AP005137.2-201ENST00000609238 400 ntBASIC4.27□□□□□ -1.73
LTBQ06643 AC005962.2-201ENST00000611427 652 ntBASIC4.27□□□□□ -1.73
LTBQ06643 AC005332.10-201ENST00000612725 619 ntBASIC4.27□□□□□ -1.73
LTBQ06643 AC121761.2-201ENST00000617300 689 ntBASIC4.27□□□□□ -1.73
LTBQ06643 AL121890.2-201ENST00000617644 465 ntBASIC4.27□□□□□ -1.73
LTBQ06643 AC073968.1-201ENST00000618594 637 ntBASIC4.27□□□□□ -1.73
LTBQ06643 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LTBQ06643 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LTBQ06643 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
LTBQ06643 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
LTBQ06643 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.27□□□□□ -1.73
LTBQ06643 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LTBQ06643 AC005332.5-201ENST00000591222 2919 ntBASIC4.27□□□□□ -1.73
LTBQ06643 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.27□□□□□ -1.73
LTBQ06643 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
LTBQ06643 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LTBQ06643 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
LTBQ06643 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LTBQ06643 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LTBQ06643 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LTBQ06643 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LTBQ06643 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LTBQ06643 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LTBQ06643 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LTBQ06643 AC139713.2-214ENST00000642059 1811 ntBASIC4.26□□□□□ -1.73
LTBQ06643 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LTBQ06643 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.26□□□□□ -1.73
LTBQ06643 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LTBQ06643 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LTBQ06643 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.26□□□□□ -1.73
LTBQ06643 RNU6-532P-201ENST00000384318 107 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms